MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:88397438-88547583

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43431	5	88423215 to 88423554	339	+	pseudogene	predicted gene 43431
Gm7721	5	88427813 to 88428358	545	+	pseudogene	predicted gene 7721
Tssr46997	5	88455988 to 88455993	5	+	TSS region	transcription start site region 46997
Ambn	5	88455991 to 88468531	12540	+	protein coding gene	ameloblastin
D5Mit273.1	5	88472388 to 88472503	115		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 273.1
D5Mit273	5	88472438 to 88472583	145		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 273
Enam	5	88487975 to 88506049	18074	+	protein coding gene	enamelin
Jchain	5	88519809 to 88527891	8082	-	protein coding gene	immunoglobulin joining chain
Tssr46998	5	88520589 to 88520607	18	+	TSS region	transcription start site region 46998
Tssr51678	5	88521206 to 88521209	3	-	TSS region	transcription start site region 51678
Tssr46999	5	88521246 to 88521264	18	+	TSS region	transcription start site region 46999
Tssr51679	5	88522534 to 88522555	21	-	TSS region	transcription start site region 51679
Tssr51680	5	88526496 to 88526506	10	-	TSS region	transcription start site region 51680
Tssr51681	5	88526517 to 88526540	23	-	TSS region	transcription start site region 51681
Tssr51682	5	88527795 to 88527820	25	-	TSS region	transcription start site region 51682
Tssr51683	5	88527841 to 88527852	11	-	TSS region	transcription start site region 51683
Tssr47000	5	88531965 to 88531975	10	+	TSS region	transcription start site region 47000
Gm43432	5	88545036 to 88545156	120	-	pseudogene	predicted gene 43432