Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:87864800-87994803

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr46933 5 87885004 to 87885018 14 + TSS region transcription start site region 46933
Odam 5 87885029 to 87894174 9145 + protein coding gene odontogenic, ameloblast asssociated
Tssr46934 5 87887475 to 87887490 15 + TSS region transcription start site region 46934
Tssr46935 5 87887491 to 87887520 29 + TSS region transcription start site region 46935
Tssr46936 5 87887524 to 87887531 7 + TSS region transcription start site region 46936
1700066N21Rik 5 87908588 to 87979351 70763 - antisense lncRNA gene RIKEN cDNA 1700066N21 gene
Tssr46937 5 87908758 to 87908777 19 + TSS region transcription start site region 46937
BC037156 5 87908779 to 87914171 5392 + lincRNA gene cDNA sequence BC037156
Csn3 5 87925575 to 87932545 6970 + protein coding gene casein kappa
Tssr46938 5 87925594 to 87925621 27 + TSS region transcription start site region 46938
Tssr46939 5 87925624 to 87925639 15 + TSS region transcription start site region 46939
Tssr46940 5 87927031 to 87927049 18 + TSS region transcription start site region 46940
Tssr46941 5 87927570 to 87927591 21 + TSS region transcription start site region 46941
Tssr46942 5 87928261 to 87928274 13 + TSS region transcription start site region 46942
Tssr46943 5 87929728 to 87929739 11 + TSS region transcription start site region 46943
Tssr46944 5 87929756 to 87929774 18 + TSS region transcription start site region 46944
Tssr46945 5 87929778 to 87929795 17 + TSS region transcription start site region 46945
Tssr46946 5 87929800 to 87929803 3 + TSS region transcription start site region 46946
Tssr46947 5 87929810 to 87929815 5 + TSS region transcription start site region 46947
Tssr46948 5 87929829 to 87929849 20 + TSS region transcription start site region 46948
Tssr46949 5 87929853 to 87929865 12 + TSS region transcription start site region 46949
Tssr51656 5 87929864 to 87929886 22 - TSS region transcription start site region 51656
Tssr46950 5 87929868 to 87929872 4 + TSS region transcription start site region 46950
Tssr46951 5 87929874 to 87929878 4 + TSS region transcription start site region 46951
Tssr46952 5 87929885 to 87929906 21 + TSS region transcription start site region 46952
Tssr46953 5 87929909 to 87929916 7 + TSS region transcription start site region 46953
Tssr46954 5 87929922 to 87929948 26 + TSS region transcription start site region 46954
Tssr46955 5 87929958 to 87929961 3 + TSS region transcription start site region 46955
Tssr51657 5 87929963 to 87929974 11 - TSS region transcription start site region 51657
Tssr51658 5 87929976 to 87929980 4 - TSS region transcription start site region 51658
Tssr51659 5 87929984 to 87929989 5 - TSS region transcription start site region 51659
Tssr51660 5 87930029 to 87930058 29 - TSS region transcription start site region 51660
Tssr51661 5 87930088 to 87930108 20 - TSS region transcription start site region 51661
Tssr46956 5 87932393 to 87932398 5 + TSS region transcription start site region 46956
Tssr46957 5 87932445 to 87932454 9 + TSS region transcription start site region 46957
Tssr46958 5 87956252 to 87956272 20 + TSS region transcription start site region 46958
Tssr46959 5 87956273 to 87956315 42 + TSS region transcription start site region 46959
Tssr46960 5 87963273 to 87963276 3 + TSS region transcription start site region 46960
Tssr1532 5 87963334 to 87963335 1 + TSS region transcription start site region 1532
BC051076 5 87963485 to 87966352 2867 + antisense lncRNA gene cDNA sequence BC051076
Tssr46961 5 87964400 to 87964407 7 + TSS region transcription start site region 46961
Tssr46962 5 87969455 to 87969461 6 + TSS region transcription start site region 46962
2310003L06Rik 5 87969459 to 87972870 3411 + protein coding gene RIKEN cDNA 2310003L06 gene
Gm28434 5 87969517 to 88008277 38760 + protein coding gene predicted gene 28434
Tssr46963 5 87979432 to 87979458 26 + TSS region transcription start site region 46963
Cabs1 5 87979451 to 87981541 2090 + protein coding gene calcium binding protein, spermatid specific 1
Tssr46964 5 87979470 to 87979477 7 + TSS region transcription start site region 46964