Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:87539232-87670629

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sult1d1 5 87554650 to 87569006 14356 - protein coding gene sulfotransferase family 1D, member 1
Tssr51590 5 87566109 to 87566119 10 - TSS region transcription start site region 51590
Tssr51591 5 87567348 to 87567365 17 - TSS region transcription start site region 51591
Tssr51592 5 87567383 to 87567403 20 - TSS region transcription start site region 51592
Tssr51593 5 87568890 to 87568908 18 - TSS region transcription start site region 51593
Tssr51594 5 87568913 to 87568924 11 - TSS region transcription start site region 51594
Tssr51595 5 87568939 to 87568951 12 - TSS region transcription start site region 51595
Tssr51596 5 87568966 to 87568978 12 - TSS region transcription start site region 51596
Tssr51597 5 87568982 to 87569002 20 - TSS region transcription start site region 51597
Tssr51598 5 87569023 to 87569038 15 - TSS region transcription start site region 51598
Tssr51599 5 87569067 to 87569074 7 - TSS region transcription start site region 51599
Sult1e1 5 87575969 to 87591594 15625 - protein coding gene sulfotransferase family 1E, member 1
Tssr51600 5 87591567 to 87591578 11 - TSS region transcription start site region 51600
Tssr51601 5 87591582 to 87591602 20 - TSS region transcription start site region 51601
Mir3969 5 87595902 to 87595993 91 - miRNA gene microRNA 3969
Gm43368 5 87601071 to 87601479 408 + pseudogene predicted gene 43368
Gm21043 5 87604232 to 87605629 1397 + pseudogene predicted gene, 21043
Tssr46861 5 87666200 to 87666218 18 + TSS region transcription start site region 46861
Csn1s1 5 87666208 to 87682578 16370 + protein coding gene casein alpha s1
Tssr46862 5 87666965 to 87666976 11 + TSS region transcription start site region 46862
Tssr46863 5 87667226 to 87667237 11 + TSS region transcription start site region 46863
Tssr46864 5 87667243 to 87667258 15 + TSS region transcription start site region 46864
Tssr46865 5 87668325 to 87668330 5 + TSS region transcription start site region 46865
Tssr46866 5 87668604 to 87668608 4 + TSS region transcription start site region 46866
Tssr46867 5 87668981 to 87669010 29 + TSS region transcription start site region 46867
Tssr46868 5 87669510 to 87669530 20 + TSS region transcription start site region 46868
Tssr51602 5 87669535 to 87669562 27 - TSS region transcription start site region 51602