Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:87398173-87678186

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm2439 5 87392058 to 87400371 8313 - pseudogene predicted gene 2439
Gm43370 5 87401319 to 87402978 1659 - pseudogene predicted gene 43370
Ugt2b38 5 87409942 to 87424203 14261 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B38
Tssr51582 5 87424201 to 87424205 4 - TSS region transcription start site region 51582
Ugt2a1 5 87459490 to 87490871 31381 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide A1
Ugt2a2 5 87459493 to 87482258 22765 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide A2
Gm43638 5 87460240 to 87486806 26566 - protein coding gene predicted gene 43638
Tssr51583 5 87482278 to 87482283 5 - TSS region transcription start site region 51583
Tssr51584 5 87490869 to 87490875 6 - TSS region transcription start site region 51584
Sult1b1 5 87513339 to 87538195 24856 - protein coding gene sulfotransferase family 1B, member 1
Tssr51585 5 87535113 to 87535143 30 - TSS region transcription start site region 51585
Tssr51586 5 87535153 to 87535179 26 - TSS region transcription start site region 51586
Tssr51587 5 87538173 to 87538186 13 - TSS region transcription start site region 51587
Tssr51588 5 87538188 to 87538201 13 - TSS region transcription start site region 51588
Tssr51589 5 87538202 to 87538213 11 - TSS region transcription start site region 51589
Sult1d1 5 87554650 to 87569006 14356 - protein coding gene sulfotransferase family 1D, member 1
Tssr51590 5 87566109 to 87566119 10 - TSS region transcription start site region 51590
Tssr51591 5 87567348 to 87567365 17 - TSS region transcription start site region 51591
Tssr51592 5 87567383 to 87567403 20 - TSS region transcription start site region 51592
Tssr51593 5 87568890 to 87568908 18 - TSS region transcription start site region 51593
Tssr51594 5 87568913 to 87568924 11 - TSS region transcription start site region 51594
Tssr51595 5 87568939 to 87568951 12 - TSS region transcription start site region 51595
Tssr51596 5 87568966 to 87568978 12 - TSS region transcription start site region 51596
Tssr51597 5 87568982 to 87569002 20 - TSS region transcription start site region 51597
Tssr51598 5 87569023 to 87569038 15 - TSS region transcription start site region 51598
Tssr51599 5 87569067 to 87569074 7 - TSS region transcription start site region 51599
Sult1e1 5 87575969 to 87591594 15625 - protein coding gene sulfotransferase family 1E, member 1
Tssr51600 5 87591567 to 87591578 11 - TSS region transcription start site region 51600
Tssr51601 5 87591582 to 87591602 20 - TSS region transcription start site region 51601
Mir3969 5 87595902 to 87595993 91 - miRNA gene microRNA 3969
Gm43368 5 87601071 to 87601479 408 + pseudogene predicted gene 43368
Gm21043 5 87604232 to 87605629 1397 + pseudogene predicted gene, 21043
Tssr46861 5 87666200 to 87666218 18 + TSS region transcription start site region 46861
Csn1s1 5 87666208 to 87682578 16370 + protein coding gene casein alpha s1
Tssr46862 5 87666965 to 87666976 11 + TSS region transcription start site region 46862
Tssr46863 5 87667226 to 87667237 11 + TSS region transcription start site region 46863
Tssr46864 5 87667243 to 87667258 15 + TSS region transcription start site region 46864
Tssr46865 5 87668325 to 87668330 5 + TSS region transcription start site region 46865
Tssr46866 5 87668604 to 87668608 4 + TSS region transcription start site region 46866
Tssr46867 5 87668981 to 87669010 29 + TSS region transcription start site region 46867
Tssr46868 5 87669510 to 87669530 20 + TSS region transcription start site region 46868
Tssr51602 5 87669535 to 87669562 27 - TSS region transcription start site region 51602
Tssr1524 5 87670882 to 87670897 15 + TSS region transcription start site region 1524
Tssr51603 5 87670910 to 87670928 18 - TSS region transcription start site region 51603
Tssr46869 5 87670998 to 87671016 18 + TSS region transcription start site region 46869
Tssr51604 5 87671028 to 87671053 25 - TSS region transcription start site region 51604
Tssr51605 5 87671543 to 87671559 16 - TSS region transcription start site region 51605
Tssr1525 5 87672157 to 87672190 33 + TSS region transcription start site region 1525
Tssr46870 5 87673222 to 87673262 40 + TSS region transcription start site region 46870
Tssr46871 5 87674047 to 87674065 18 + TSS region transcription start site region 46871
Tssr51606 5 87674076 to 87674095 19 - TSS region transcription start site region 51606
Tssr46872 5 87674190 to 87674220 30 + TSS region transcription start site region 46872
Tssr51607 5 87674219 to 87674256 37 - TSS region transcription start site region 51607
Tssr46873 5 87675001 to 87675030 29 + TSS region transcription start site region 46873
Tssr51608 5 87675035 to 87675062 27 - TSS region transcription start site region 51608
Tssr46874 5 87677029 to 87677031 2 + TSS region transcription start site region 46874
Tssr46875 5 87677588 to 87677621 33 + TSS region transcription start site region 46875
Tssr46876 5 87677853 to 87677856 3 + TSS region transcription start site region 46876
Tssr46877 5 87678016 to 87678060 44 + TSS region transcription start site region 46877
Tssr51609 5 87678067 to 87678083 16 - TSS region transcription start site region 51609