Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:8728139-8868164

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcb1a 5 8660077 to 8748575 88498 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 1A
Tssr45127 5 8728205 to 8728209 4 + TSS region transcription start site region 45127
Gm42686 5 8731661 to 8735768 4107 - unclassified gene predicted gene 42686
Gm5106 5 8781186 to 8798729 17543 - antisense lncRNA gene predicted gene 5106
D5Mit48 5 8797672 to 8797875 203 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 48
Cpgi15536 5 8798076 to 8798718 642 CpG island CpG island 15536
Tssr45128 5 8798139 to 8798164 25 + TSS region transcription start site region 45128
Abcb1b 5 8798147 to 8866314 68167 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 1B
Tssr45129 5 8798644 to 8798654 10 + TSS region transcription start site region 45129
Tssr45130 5 8798677 to 8798684 7 + TSS region transcription start site region 45130
Tssr45131 5 8799777 to 8799780 3 + TSS region transcription start site region 45131
Tssr45132 5 8808095 to 8808106 11 + TSS region transcription start site region 45132
7330423F06Rik 5 8831147 to 8831447 300 + unclassified gene RIKEN cDNA 7330423F06 gene
Tssr45133 5 8833458 to 8833460 2 + TSS region transcription start site region 45133
D5Mit146 5 8840693 to 8840817 124 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 146
D5Mit47 5 8865949 to 8866062 113 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 47
Mom5 5 33318293 to 8797672 -24520621 QTL modifier of Min 5
Kdnw1 5 40372526 to 8865949 -31506577 QTL kidney weight 1
Sle6 5 87693978 to 8840693 -78853285 QTL systemic lupus erythematosus susceptibility 6