Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:87007136-87667139

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ugt2b35 5 87000860 to 87013274 12414 + protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B35
Tssr46860 5 87010192 to 87010203 11 + TSS region transcription start site region 46860
Gm18635 5 87014151 to 87014929 778 + pseudogene predicted gene, 18635
Gm42465 5 87054603 to 87055665 1062 - pseudogene predicted gene 42465
Ugt2b36 5 87065927 to 87092555 26628 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B36
Tssr51565 5 87091150 to 87091178 28 - TSS region transcription start site region 51565
Tssr51566 5 87091984 to 87091987 3 - TSS region transcription start site region 51566
Tssr51567 5 87092007 to 87092022 15 - TSS region transcription start site region 51567
Tssr51568 5 87092034 to 87092041 7 - TSS region transcription start site region 51568
Tssr51569 5 87092074 to 87092087 13 - TSS region transcription start site region 51569
Tssr51570 5 87092535 to 87092542 7 - TSS region transcription start site region 51570
Tssr51571 5 87092548 to 87092563 15 - TSS region transcription start site region 51571
Gm31230 5 87097182 to 87100395 3213 - pseudogene predicted gene, 31230
Gm42795 5 87114534 to 87114609 75 - pseudogene predicted gene 42795
Ugt2b5 5 87124960 to 87140318 15358 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B5
Tssr51572 5 87127856 to 87127858 2 - TSS region transcription start site region 51572
Tssr51573 5 87140329 to 87140352 23 - TSS region transcription start site region 51573
Gm5717 5 87162277 to 87175278 13001 - pseudogene predicted gene 5717
Gm43369 5 87191622 to 87193173 1551 - pseudogene predicted gene 43369
Gm19418 5 87207117 to 87218111 10994 - pseudogene predicted gene, 19418
Ugt2b37 5 87240492 to 87254788 14296 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B37
Tssr1523 5 87254800 to 87254818 18 - TSS region transcription start site region 1523
Gm7646 5 87290179 to 87311817 21638 - pseudogene predicted gene 7646
Tssr51574 5 87296266 to 87296267 1 - TSS region transcription start site region 51574
Ugt2a3 5 87324972 to 87337195 12223 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide A3
Tssr51575 5 87336497 to 87336526 29 - TSS region transcription start site region 51575
Tssr51576 5 87336552 to 87336563 11 - TSS region transcription start site region 51576
Tssr51577 5 87336676 to 87336686 10 - TSS region transcription start site region 51577
Tssr51578 5 87337119 to 87337131 12 - TSS region transcription start site region 51578
Tssr51579 5 87337136 to 87337139 3 - TSS region transcription start site region 51579
Tssr51580 5 87337165 to 87337203 38 - TSS region transcription start site region 51580
Gm7652 5 87351480 to 87364818 13338 - pseudogene predicted gene 7652
Gm42796 5 87355835 to 87356921 1086 + unclassified gene predicted gene 42796
Gm35570 5 87369803 to 87370483 680 - pseudogene predicted gene, 35570
Gm21049 5 87376158 to 87379920 3762 - pseudogene predicted gene, 21049
D5Mit260 5 87377012 to 87377132 120 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 260
Tssr51581 5 87379949 to 87379954 5 - TSS region transcription start site region 51581
Gm2439 5 87392058 to 87400371 8313 - pseudogene predicted gene 2439
Gm43370 5 87401319 to 87402978 1659 - pseudogene predicted gene 43370
Ugt2b38 5 87409942 to 87424203 14261 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide B38
Tssr51582 5 87424201 to 87424205 4 - TSS region transcription start site region 51582
Ugt2a1 5 87459490 to 87490871 31381 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide A1
Ugt2a2 5 87459493 to 87482258 22765 - protein coding gene UDP glucuronosyltransferase 2 family, polypeptide A2
Gm43638 5 87460240 to 87486806 26566 - protein coding gene predicted gene 43638
Tssr51583 5 87482278 to 87482283 5 - TSS region transcription start site region 51583
Tssr51584 5 87490869 to 87490875 6 - TSS region transcription start site region 51584
Sult1b1 5 87513339 to 87538195 24856 - protein coding gene sulfotransferase family 1B, member 1
Tssr51585 5 87535113 to 87535143 30 - TSS region transcription start site region 51585
Tssr51586 5 87535153 to 87535179 26 - TSS region transcription start site region 51586
Tssr51587 5 87538173 to 87538186 13 - TSS region transcription start site region 51587
Tssr51588 5 87538188 to 87538201 13 - TSS region transcription start site region 51588
Tssr51589 5 87538202 to 87538213 11 - TSS region transcription start site region 51589
Sult1d1 5 87554650 to 87569006 14356 - protein coding gene sulfotransferase family 1D, member 1
Tssr51590 5 87566109 to 87566119 10 - TSS region transcription start site region 51590
Tssr51591 5 87567348 to 87567365 17 - TSS region transcription start site region 51591
Tssr51592 5 87567383 to 87567403 20 - TSS region transcription start site region 51592
Tssr51593 5 87568890 to 87568908 18 - TSS region transcription start site region 51593
Tssr51594 5 87568913 to 87568924 11 - TSS region transcription start site region 51594
Tssr51595 5 87568939 to 87568951 12 - TSS region transcription start site region 51595
Tssr51596 5 87568966 to 87568978 12 - TSS region transcription start site region 51596
Tssr51597 5 87568982 to 87569002 20 - TSS region transcription start site region 51597
Tssr51598 5 87569023 to 87569038 15 - TSS region transcription start site region 51598
Tssr51599 5 87569067 to 87569074 7 - TSS region transcription start site region 51599
Sult1e1 5 87575969 to 87591594 15625 - protein coding gene sulfotransferase family 1E, member 1
Tssr51600 5 87591567 to 87591578 11 - TSS region transcription start site region 51600
Tssr51601 5 87591582 to 87591602 20 - TSS region transcription start site region 51601
Mir3969 5 87595902 to 87595993 91 - miRNA gene microRNA 3969
Gm43368 5 87601071 to 87601479 408 + pseudogene predicted gene 43368
Gm21043 5 87604232 to 87605629 1397 + pseudogene predicted gene, 21043
Tssr46861 5 87666200 to 87666218 18 + TSS region transcription start site region 46861
Csn1s1 5 87666208 to 87682578 16370 + protein coding gene casein alpha s1
Tssr46862 5 87666965 to 87666976 11 + TSS region transcription start site region 46862