Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:85778038-86568052

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr46824 5 85778283 to 85778287 4 + TSS region transcription start site region 46824
Gm24626 5 85829627 to 85829787 160 + snRNA gene predicted gene, 24626
Gm43564 5 86005407 to 86005617 210 - pseudogene predicted gene 43564
Cenpc1 5 86012024 to 86065583 53559 - protein coding gene centromere protein C1
Tssr51514 5 86020846 to 86020854 8 - TSS region transcription start site region 51514
Tssr51515 5 86037103 to 86037111 8 - TSS region transcription start site region 51515
Cpgi16025 5 86065117 to 86065951 834 CpG island CpG island 16025
Tssr51516 5 86065476 to 86065501 25 - TSS region transcription start site region 51516
Tssr51517 5 86065504 to 86065525 21 - TSS region transcription start site region 51517
Tssr51518 5 86065531 to 86065574 43 - TSS region transcription start site region 51518
Tssr51519 5 86065578 to 86065587 9 - TSS region transcription start site region 51519
Tssr46825 5 86065786 to 86065812 26 + TSS region transcription start site region 46825
Gm2287 5 86066757 to 86067895 1138 + pseudogene predicted gene 2287
Tssr46826 5 86071545 to 86071562 17 + TSS region transcription start site region 46826
Tssr46827 5 86071567 to 86071586 19 + TSS region transcription start site region 46827
Tssr46828 5 86071616 to 86071628 12 + TSS region transcription start site region 46828
Tssr46829 5 86071734 to 86071756 22 + TSS region transcription start site region 46829
Stap1 5 86071746 to 86106125 34379 + protein coding gene signal transducing adaptor family member 1
Gm24524 5 86079766 to 86079935 169 + snRNA gene predicted gene, 24524
Tssr46830 5 86081171 to 86081212 41 + TSS region transcription start site region 46830
Tssr46831 5 86083276 to 86083282 6 + TSS region transcription start site region 46831
Tssr46832 5 86085815 to 86085824 9 + TSS region transcription start site region 46832
Tssr46833 5 86086188 to 86086219 31 + TSS region transcription start site region 46833
Tssr46834 5 86086265 to 86086281 16 + TSS region transcription start site region 46834
Tssr46835 5 86089365 to 86089368 3 + TSS region transcription start site region 46835
Tssr46836 5 86090952 to 86090966 14 + TSS region transcription start site region 46836
Tssr46837 5 86091316 to 86091356 40 + TSS region transcription start site region 46837
Tssr46838 5 86092210 to 86092216 6 + TSS region transcription start site region 46838
Tssr46839 5 86093229 to 86093240 11 + TSS region transcription start site region 46839
Tssr46840 5 86093241 to 86093258 17 + TSS region transcription start site region 46840
Tssr46841 5 86093263 to 86093279 16 + TSS region transcription start site region 46841
Tssr46842 5 86104099 to 86104110 11 + TSS region transcription start site region 46842
Tssr46843 5 86110243 to 86110249 6 + TSS region transcription start site region 46843
Uba6 5 86110720 to 86172743 62023 - protein coding gene ubiquitin-like modifier activating enzyme 6
Tssr51520 5 86159303 to 86159316 13 - TSS region transcription start site region 51520
Cpgi16026 5 86172162 to 86173195 1033 CpG island CpG island 16026
Tssr51521 5 86172747 to 86172793 46 - TSS region transcription start site region 51521
Tssr46844 5 86173038 to 86173052 14 + TSS region transcription start site region 46844
Gnrhr 5 86180754 to 86197901 17147 - protein coding gene gonadotropin releasing hormone receptor
Tssr51522 5 86197847 to 86197856 9 - TSS region transcription start site region 51522
Tssr51523 5 86197881 to 86197895 14 - TSS region transcription start site region 51523
Tssr51524 5 86197925 to 86197935 10 - TSS region transcription start site region 51524
Tmprss11c 5 86231481 to 86289308 57827 - protein coding gene transmembrane protease, serine 11c
Gm25473 5 86236855 to 86236961 106 - snRNA gene predicted gene, 25473
Tmprss11d 5 86302854 to 86373387 70533 - protein coding gene transmembrane protease, serine 11d
Tssr51525 5 86327743 to 86327757 14 - TSS region transcription start site region 51525
Gm35367 5 86344043 to 86396805 52762 + lncRNA gene predicted gene, 35367
Tssr51526 5 86373401 to 86373407 6 - TSS region transcription start site region 51526
Tssr51527 5 86373413 to 86373428 15 - TSS region transcription start site region 51527
Tssr51528 5 86373438 to 86373450 12 - TSS region transcription start site region 51528
Tssr51529 5 86373537 to 86373567 30 - TSS region transcription start site region 51529
Tmprss11a 5 86410410 to 86468990 58580 - protein coding gene transmembrane protease, serine 11a
Tssr51530 5 86469055 to 86469062 7 - TSS region transcription start site region 51530
Tssr51531 5 86469072 to 86469123 51 - TSS region transcription start site region 51531
Tssr51532 5 86469134 to 86469141 7 - TSS region transcription start site region 51532
Tmprss11g 5 86485877 to 86518600 32723 - protein coding gene transmembrane protease, serine 11g
Tssr46845 5 86496131 to 86496135 4 + TSS region transcription start site region 46845
Tssr51533 5 86518549 to 86518561 12 - TSS region transcription start site region 51533
Tssr51534 5 86518562 to 86518577 15 - TSS region transcription start site region 51534
Tssr51535 5 86518578 to 86518610 32 - TSS region transcription start site region 51535
Tssr51536 5 86518616 to 86518627 11 - TSS region transcription start site region 51536
Tssr51537 5 86518677 to 86518690 13 - TSS region transcription start site region 51537
Tmprss11f 5 86521898 to 86632424 110526 - protein coding gene transmembrane protease, serine 11f