Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:8540633-8780652

Filter by:
22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rundc3b 5 8490334 to 8622952 132618 - protein coding gene RUN domain containing 3B
Tssr45118 5 8567093 to 8567110 17 + TSS region transcription start site region 45118
Tssr45119 5 8567113 to 8567123 10 + TSS region transcription start site region 45119
Tssr45120 5 8606564 to 8606568 4 + TSS region transcription start site region 45120
Cpgi15534 5 8622087 to 8623568 1481 CpG island CpG island 15534
Tssr50089 5 8622768 to 8622854 86 - TSS region transcription start site region 50089
Tssr50090 5 8622855 to 8622921 66 - TSS region transcription start site region 50090
Tssr50091 5 8622951 to 8622970 19 - TSS region transcription start site region 50091
Tssr50092 5 8622984 to 8622998 14 - TSS region transcription start site region 50092
Tssr50093 5 8623004 to 8623051 47 - TSS region transcription start site region 50093
Tssr45121 5 8659958 to 8659960 2 + TSS region transcription start site region 45121
Tssr45122 5 8660021 to 8660028 7 + TSS region transcription start site region 45122
Tssr45123 5 8660040 to 8660047 7 + TSS region transcription start site region 45123
Tssr45124 5 8660059 to 8660099 40 + TSS region transcription start site region 45124
Abcb1a 5 8660077 to 8748575 88498 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 1A
Cpgi15535 5 8660191 to 8660586 395 CpG island CpG island 15535
Tssr45125 5 8660605 to 8660623 18 + TSS region transcription start site region 45125
Tssr45126 5 8660633 to 8660652 19 + TSS region transcription start site region 45126
Gm42684 5 8669520 to 8673134 3614 + unclassified gene predicted gene 42684
Gm31157 5 8692556 to 8695776 3220 - lncRNA gene predicted gene, 31157
Tssr45127 5 8728205 to 8728209 4 + TSS region transcription start site region 45127
Gm42686 5 8731661 to 8735768 4107 - unclassified gene predicted gene 42686