Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:83963805-84897620

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epha5 5 84054761 to 84417382 362621 - protein coding gene Eph receptor A5
Tssr51501 5 84066985 to 84067014 29 - TSS region transcription start site region 51501
Tssr51502 5 84067041 to 84067068 27 - TSS region transcription start site region 51502
Tssr51503 5 84067102 to 84067112 10 - TSS region transcription start site region 51503
Tssr51504 5 84067116 to 84067139 23 - TSS region transcription start site region 51504
Tssr51505 5 84067185 to 84067204 19 - TSS region transcription start site region 51505
Tssr46823 5 84123212 to 84123217 5 + TSS region transcription start site region 46823
Hmgn2-ps1 5 84123313 to 84123591 278 + pseudogene high mobility group nucleosomal binding domain 2, pseudogene 1
Tssr51506 5 84321734 to 84321742 8 - TSS region transcription start site region 51506
Cpgi16022 5 84416096 to 84416782 686 CpG island CpG island 16022
Cpgi16023 5 84416882 to 84417839 957 CpG island CpG island 16023
Tssr51507 5 84417112 to 84417119 7 - TSS region transcription start site region 51507
Tssr51508 5 84417143 to 84417150 7 - TSS region transcription start site region 51508
Tssr51509 5 84417298 to 84417309 11 - TSS region transcription start site region 51509
Tssr51510 5 84417324 to 84417337 13 - TSS region transcription start site region 51510
Tssr51511 5 84417368 to 84417389 21 - TSS region transcription start site region 51511
Tssr51512 5 84417395 to 84417400 5 - TSS region transcription start site region 51512
Tssr51513 5 84417478 to 84417489 11 - TSS region transcription start site region 51513
Gm42163 5 84417527 to 84466952 49425 + lncRNA gene predicted gene, 42163
Gm43532 5 84428805 to 84432620 3815 + lincRNA gene predicted gene 43532
Gm43531 5 84618706 to 84619819 1113 + pseudogene predicted gene 43531
Lfibq5 5 84635994 to 89818182 5182188 QTL liver fibrosis QTL 5
D5Mit414 5 84641880 to 84642009 129 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 414
Gm20104 5 84807321 to 84808331 1010 - pseudogene predicted gene, 20104
Gm21006 5 84866179 to 84866845 666 - pseudogene predicted gene, 21006
Cpgi16024 5 84895745 to 84896128 383 CpG island CpG island 16024