Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:83308163-84418751

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tecrl 5 83278145 to 83355195 77050 - protein coding gene trans-2,3-enoyl-CoA reductase-like
Tssr51494 5 83354888 to 83354911 23 - TSS region transcription start site region 51494
Tssr51495 5 83354924 to 83354944 20 - TSS region transcription start site region 51495
Tssr51496 5 83354946 to 83354973 27 - TSS region transcription start site region 51496
Tssr51497 5 83354979 to 83355060 81 - TSS region transcription start site region 51497
Tssr51498 5 83355072 to 83355092 20 - TSS region transcription start site region 51498
Tssr51499 5 83355093 to 83355113 20 - TSS region transcription start site region 51499
Tssr51500 5 83355120 to 83355127 7 - TSS region transcription start site region 51500
M1fscn2 5 83381814 to 83381814 0 QTL modifier 1 of Fscn2
M2fscn2 5 83381814 to 83381814 0 QTL modifier 2 of FSCN2
D5Mit396 5 83446310 to 83446443 133 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 396
Gm44303 5 83464794 to 83464876 82 + miRNA gene predicted gene, 44303
D5Mit397 5 83520791 to 83521014 223 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 397
Gm25765 5 83648823 to 83648954 131 - snoRNA gene predicted gene, 25765
Gm25806 5 83690004 to 83690125 121 - snRNA gene predicted gene, 25806
Gm24792 5 83723462 to 83723589 127 - snoRNA gene predicted gene, 24792
Gm2337 5 83728594 to 83729157 563 + pseudogene predicted gene 2337
Tssr46822 5 83837189 to 83837195 6 + TSS region transcription start site region 46822
Gm4866 5 83863163 to 83863751 588 + pseudogene predicted gene 4866
Epha5 5 84054761 to 84417382 362621 - protein coding gene Eph receptor A5
Tssr51501 5 84066985 to 84067014 29 - TSS region transcription start site region 51501
Tssr51502 5 84067041 to 84067068 27 - TSS region transcription start site region 51502
Tssr51503 5 84067102 to 84067112 10 - TSS region transcription start site region 51503
Tssr51504 5 84067116 to 84067139 23 - TSS region transcription start site region 51504
Tssr51505 5 84067185 to 84067204 19 - TSS region transcription start site region 51505
Tssr46823 5 84123212 to 84123217 5 + TSS region transcription start site region 46823
Hmgn2-ps1 5 84123313 to 84123591 278 + pseudogene high mobility group nucleosomal binding domain 2, pseudogene 1
Tssr51506 5 84321734 to 84321742 8 - TSS region transcription start site region 51506
Cpgi16022 5 84416096 to 84416782 686 CpG island CpG island 16022
Cpgi16023 5 84416882 to 84417839 957 CpG island CpG island 16023
Tssr51507 5 84417112 to 84417119 7 - TSS region transcription start site region 51507
Tssr51508 5 84417143 to 84417150 7 - TSS region transcription start site region 51508
Tssr51509 5 84417298 to 84417309 11 - TSS region transcription start site region 51509
Tssr51510 5 84417324 to 84417337 13 - TSS region transcription start site region 51510
Tssr51511 5 84417368 to 84417389 21 - TSS region transcription start site region 51511
Tssr51512 5 84417395 to 84417400 5 - TSS region transcription start site region 51512
Tssr51513 5 84417478 to 84417489 11 - TSS region transcription start site region 51513
Gm42163 5 84417527 to 84466952 49425 + lncRNA gene predicted gene, 42163