Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:81526909-82063426

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgrl3 5 81020138 to 81825133 804995 + protein coding gene adhesion G protein-coupled receptor L3
Gm43084 5 81535726 to 81536672 946 + unclassified gene predicted gene 43084
Tssr51485 5 81556063 to 81556076 13 - TSS region transcription start site region 51485
Tssr46816 5 81556347 to 81556362 15 + TSS region transcription start site region 46816
Tssr46817 5 81571578 to 81571582 4 + TSS region transcription start site region 46817
Tssr46818 5 81583209 to 81583227 18 + TSS region transcription start site region 46818
Gm46946 5 81628063 to 81628845 782 - lncRNA gene predicted gene, 46946
Gm22048 5 81735927 to 81736015 88 + miRNA gene predicted gene, 22048
Gm16054 5 81791909 to 81798426 6517 - antisense lncRNA gene predicted gene 16054
Tssr46819 5 81794335 to 81794348 13 + TSS region transcription start site region 46819
Tssr46820 5 81794366 to 81794377 11 + TSS region transcription start site region 46820
Cpgi16020 5 81794482 to 81794992 510 CpG island CpG island 16020
Tssr46821 5 81800735 to 81800740 5 + TSS region transcription start site region 46821
Tssr51486 5 81801013 to 81801023 10 - TSS region transcription start site region 51486
2900064F13Rik 5 81826816 to 81827823 1007 + unclassified gene RIKEN cDNA 2900064F13 gene
Cpgi16021 5 81969987 to 81970268 281 CpG island CpG island 16021
D5Mit359 5 82021630 to 82021744 114 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 359