MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:81521013-82081023

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Adgrl3	5	81020138 to 81825133	804995	+	protein coding gene	adhesion G protein-coupled receptor L3
D5Mit236	5	81525572 to 81525760	188		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 236
Gm43084	5	81535726 to 81536672	946	+	unclassified gene	predicted gene 43084
Tssr51485	5	81556063 to 81556076	13	-	TSS region	transcription start site region 51485
Tssr46816	5	81556347 to 81556362	15	+	TSS region	transcription start site region 46816
Tssr46817	5	81571578 to 81571582	4	+	TSS region	transcription start site region 46817
Tssr46818	5	81583209 to 81583227	18	+	TSS region	transcription start site region 46818
Gm46946	5	81628063 to 81628845	782	-	lncRNA gene	predicted gene, 46946
Gm22048	5	81735927 to 81736015	88	+	miRNA gene	predicted gene, 22048
Gm16054	5	81791909 to 81798426	6517	-	antisense lncRNA gene	predicted gene 16054
Tssr46819	5	81794335 to 81794348	13	+	TSS region	transcription start site region 46819
Tssr46820	5	81794366 to 81794377	11	+	TSS region	transcription start site region 46820
Cpgi16020	5	81794482 to 81794992	510		CpG island	CpG island 16020
Tssr46821	5	81800735 to 81800740	5	+	TSS region	transcription start site region 46821
Tssr51486	5	81801013 to 81801023	10	-	TSS region	transcription start site region 51486
2900064F13Rik	5	81826816 to 81827823	1007	+	unclassified gene	RIKEN cDNA 2900064F13 gene
Cpgi16021	5	81969987 to 81970268	281		CpG island	CpG island 16021
D5Mit359	5	82021630 to 82021744	114		DNA segment	DNA Segment, Chr 5, Massachusetts Institute of Technology 359