Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:7972352-8468160

45 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Steap4	5	7960472 to 7982213	21741	+	protein coding gene	STEAP family member 4
Tssr45102	5	7972470 to 7972501	31	+	TSS region	transcription start site region 45102
Gm15731	5	8038795 to 8040180	1385	-	antisense lncRNA gene	predicted gene 15731
Tssr45103	5	8046077 to 8046078	1	+	TSS region	transcription start site region 45103
Sri	5	8046078 to 8069314	23236	+	protein coding gene	sorcin
Tssr45104	5	8046122 to 8046152	30	+	TSS region	transcription start site region 45104
Tssr45105	5	8046162 to 8046184	22	+	TSS region	transcription start site region 45105
Tssr45106	5	8055085 to 8055114	29	+	TSS region	transcription start site region 45106
Gm15730	5	8055139 to 8055553	414	+	pseudogene	predicted gene 15730
Cpgi15530	5	8056198 to 8056908	710		CpG island	CpG island 15530
Tssr45107	5	8056536 to 8056551	15	+	TSS region	transcription start site region 45107
Tssr45108	5	8056555 to 8056585	30	+	TSS region	transcription start site region 45108
Tssr45109	5	8065119 to 8065135	16	+	TSS region	transcription start site region 45109
Tssr45110	5	8065183 to 8065194	11	+	TSS region	transcription start site region 45110
Tssr45111	5	8065197 to 8065254	57	+	TSS region	transcription start site region 45111
Tssr45112	5	8067629 to 8067652	23	+	TSS region	transcription start site region 45112
Tssr50076	5	8067644 to 8067688	44	-	TSS region	transcription start site region 50076
Tssr45113	5	8068424 to 8068440	16	+	TSS region	transcription start site region 45113
Tssr45114	5	8068443 to 8068463	20	+	TSS region	transcription start site region 45114
Tssr45115	5	8068656 to 8068678	22	+	TSS region	transcription start site region 45115
Adam22	5	8072352 to 8368160	295808	-	protein coding gene	a disintegrin and metallopeptidase domain 22
Tssr50077	5	8078493 to 8078497	4	-	TSS region	transcription start site region 50077
Tssr50078	5	8162155 to 8162159	4	-	TSS region	transcription start site region 50078
Gm21759	5	8179636 to 8181463	1827	+	pseudogene	predicted gene, 21759
Gm24196	5	8203866 to 8203975	109	-	miRNA gene	predicted gene, 24196
Gm23993	5	8242723 to 8242866	143	+	snoRNA gene	predicted gene, 23993
Gm18037	5	8316032 to 8316559	527	+	pseudogene	predicted gene, 18037
Gm42490	5	8327332 to 8329395	2063	-	unclassified gene	predicted gene 42490
Tssr50079	5	8353481 to 8353487	6	-	TSS region	transcription start site region 50079
Cpgi15531	5	8366993 to 8367509	516		CpG island	CpG island 15531
Cpgi15532	5	8367793 to 8368457	664		CpG island	CpG island 15532
Tssr50080	5	8368049 to 8368107	58	-	TSS region	transcription start site region 50080
Tssr50081	5	8368110 to 8368115	5	-	TSS region	transcription start site region 50081
Tssr50082	5	8368118 to 8368152	34	-	TSS region	transcription start site region 50082
Tssr50083	5	8368168 to 8368181	13	-	TSS region	transcription start site region 50083
Tssr50084	5	8368183 to 8368216	33	-	TSS region	transcription start site region 50084
Tssr50085	5	8368242 to 8368262	20	-	TSS region	transcription start site region 50085
Dbf4	5	8396973 to 8422716	25743	-	protein coding gene	DBF4 zinc finger
Cpgi15533	5	8422085 to 8423290	1205		CpG island	CpG island 15533
Tssr50086	5	8422642 to 8422693	51	-	TSS region	transcription start site region 50086
Tssr50087	5	8422695 to 8422727	32	-	TSS region	transcription start site region 50087
Tssr45116	5	8422831 to 8422906	75	+	TSS region	transcription start site region 45116
Slc25a40	5	8422850 to 8454797	31947	+	protein coding gene	solute carrier family 25, member 40
Tssr45117	5	8422908 to 8422925	17	+	TSS region	transcription start site region 45117
Tssr50088	5	8424205 to 8424238	33	-	TSS region	transcription start site region 50088