MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:7861085-8061101

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm22196	5	7888685 to 7888793	108	+	miRNA gene	predicted gene, 22196
Gm43478	5	7923833 to 7924124	291	+	pseudogene	predicted gene 43478
Gm30835	5	7945234 to 7960337	15103	-	lincRNA gene	predicted gene, 30835
Tssr45099	5	7960259 to 7960288	29	+	TSS region	transcription start site region 45099
Cpgi15528	5	7960269 to 7960556	287		CpG island	CpG island 15528
Tssr45100	5	7960445 to 7960464	19	+	TSS region	transcription start site region 45100
Steap4	5	7960472 to 7982213	21741	+	protein coding gene	STEAP family member 4
Tssr45101	5	7961085 to 7961101	16	+	TSS region	transcription start site region 45101
Cpgi15529	5	7971599 to 7971783	184		CpG island	CpG island 15529
Tssr45102	5	7972470 to 7972501	31	+	TSS region	transcription start site region 45102
Gm15731	5	8038795 to 8040180	1385	-	antisense lncRNA gene	predicted gene 15731
Tssr45103	5	8046077 to 8046078	1	+	TSS region	transcription start site region 45103
Sri	5	8046078 to 8069314	23236	+	protein coding gene	sorcin
Tssr45104	5	8046122 to 8046152	30	+	TSS region	transcription start site region 45104
Tssr45105	5	8046162 to 8046184	22	+	TSS region	transcription start site region 45105
Tssr45106	5	8055085 to 8055114	29	+	TSS region	transcription start site region 45106
Gm15730	5	8055139 to 8055553	414	+	pseudogene	predicted gene 15730
Cpgi15530	5	8056198 to 8056908	710		CpG island	CpG island 15530
Tssr45107	5	8056536 to 8056551	15	+	TSS region	transcription start site region 45107
Tssr45108	5	8056555 to 8056585	30	+	TSS region	transcription start site region 45108