Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:78448908-81749014

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
rslk 5 54954339 to 81227149 26272810 heritable phenotypic marker recessive spotting-like
Mthfr-ps1 5 78473885 to 78474735 850 + pseudogene 5,10-methylenetetrahydrofolate reductase, pseudogene 1
Gm43232 5 78540528 to 78540891 363 + pseudogene predicted gene 43232
Tssr1518 5 78704096 to 78704100 4 + TSS region transcription start site region 1518
D5Mit204.1 5 78770883 to 78771000 117 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 204.1
D5Mit204 5 78770976 to 78771069 93 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 204
Gm25756 5 78779859 to 78779994 135 + snoRNA gene predicted gene, 25756
D5Mit308 5 78828073 to 78828181 108 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 308
Gm43234 5 79440197 to 79440214 17 + pseudogene predicted gene 43234
Modvl1 5 79502721 to 79502841 120 QTL modifier of vacuolated lens 1
Modvl6 5 79502721 to 79502841 120 QTL modifier of vacuolated lens 6
D5Mit309 5 79502721 to 79502841 120 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 309
Ahl15 5 79502721 to 79502841 120 QTL age related hearing loss, early onset 15
Ahl2 5 79502721 to 79502841 120 QTL age related hearing loss 2
Gm18452 5 79507424 to 79508511 1087 + pseudogene predicted gene, 18452
Gm22553 5 79638815 to 79639109 294 - unclassified non-coding RNA gene predicted gene, 22553
Gm23429 5 79750381 to 79750529 148 - snRNA gene predicted gene, 23429
Gm46938 5 79810654 to 79811704 1050 - pseudogene predicted gene, 46938
Cpgi16015 5 79813453 to 79813702 249 CpG island CpG island 16015
Cpgi16016 5 79814044 to 79814338 294 CpG island CpG island 16016
Gm24304 5 80098908 to 80099014 106 + snRNA gene predicted gene, 24304
D5Mit84.1 5 80638256 to 80638372 116 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 84.1
Tssr46798 5 80684290 to 80684292 2 + TSS region transcription start site region 46798
D5Mit271.1 5 80691119 to 80691343 224 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 271.1
Gm22974 5 80893654 to 80893756 102 + snRNA gene predicted gene, 22974
Gm2199 5 80900750 to 80901623 873 - pseudogene predicted gene 2199
Gm18634 5 81013588 to 81014234 646 + pseudogene predicted gene, 18634
Cpgi16017 5 81019510 to 81022751 3241 CpG island CpG island 16017
Tssr46799 5 81019716 to 81019732 16 + TSS region transcription start site region 46799
Tssr46800 5 81019734 to 81019762 28 + TSS region transcription start site region 46800
Tssr46801 5 81020057 to 81020105 48 + TSS region transcription start site region 46801
Tssr1519 5 81020128 to 81020145 17 + TSS region transcription start site region 1519
Adgrl3 5 81020138 to 81825133 804995 + protein coding gene adhesion G protein-coupled receptor L3
Tssr46802 5 81020746 to 81020761 15 + TSS region transcription start site region 46802
Tssr46803 5 81020881 to 81020892 11 + TSS region transcription start site region 46803
Tssr46804 5 81021127 to 81021145 18 + TSS region transcription start site region 46804
Tssr46805 5 81021210 to 81021241 31 + TSS region transcription start site region 46805
Tssr46806 5 81021583 to 81021589 6 + TSS region transcription start site region 46806
Tssr46807 5 81021635 to 81021646 11 + TSS region transcription start site region 46807
Tssr46808 5 81021742 to 81021780 38 + TSS region transcription start site region 46808
Tssr46809 5 81043224 to 81043269 45 + TSS region transcription start site region 46809
Tssr46810 5 81102965 to 81102970 5 + TSS region transcription start site region 46810
Tssr46811 5 81140146 to 81140150 4 + TSS region transcription start site region 46811
Cpgi16018 5 81142138 to 81142331 193 CpG island CpG island 16018
D5Mit114 5 81227030 to 81227149 119 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 114
Lmr24d 5 81227030 to 81227149 119 QTL leishmaniasis resistance 24d
Gm43594 5 81249249 to 81252690 3441 + unclassified gene predicted gene 43594
Cpgi16019 5 81329731 to 81329965 234 CpG island CpG island 16019
Tssr46812 5 81418114 to 81418119 5 + TSS region transcription start site region 46812
Tssr46813 5 81420068 to 81420070 2 + TSS region transcription start site region 46813
Tssr46814 5 81461240 to 81461250 10 + TSS region transcription start site region 46814
Tssr46815 5 81512827 to 81512832 5 + TSS region transcription start site region 46815
A230055J12Rik 5 81514027 to 81518139 4112 unclassified non-coding RNA gene RIKEN cDNA A230055J12 gene
D5Mit236 5 81525572 to 81525760 188 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 236
Gm43084 5 81535726 to 81536672 946 + unclassified gene predicted gene 43084
Tssr51485 5 81556063 to 81556076 13 - TSS region transcription start site region 51485
Tssr46816 5 81556347 to 81556362 15 + TSS region transcription start site region 46816
Tssr46817 5 81571578 to 81571582 4 + TSS region transcription start site region 46817
Tssr46818 5 81583209 to 81583227 18 + TSS region transcription start site region 46818
Gm46946 5 81628063 to 81628845 782 - lncRNA gene predicted gene, 46946
Gm22048 5 81735927 to 81736015 88 + miRNA gene predicted gene, 22048