Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:77372376-78004212

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igfbp7 5 77349240 to 77408041 58801 - protein coding gene insulin-like growth factor binding protein 7
Tssr51483 5 77381119 to 77381124 5 - TSS region transcription start site region 51483
D5Buc53 5 77385685 to 77385833 148 DNA segment DNA segment, Chr 5, Bucan 53
Gm34648 5 77386599 to 77393683 7084 + antisense lncRNA gene predicted gene, 34648
Tssr46794 5 77387021 to 77387026 5 + TSS region transcription start site region 46794
Cpgi16011 5 77407401 to 77408329 928 CpG island CpG island 16011
Tssr46795 5 77407571 to 77407583 12 + TSS region transcription start site region 46795
Tssr51484 5 77408034 to 77408051 17 - TSS region transcription start site region 51484
Gm34728 5 77433718 to 77447675 13957 + lincRNA gene predicted gene, 34728
Cpgi16012 5 77434261 to 77434717 456 CpG island CpG island 16012
Cpgi16013 5 77459996 to 77460222 226 CpG island CpG island 16013
Cpgi16014 5 77462713 to 77462937 224 CpG island CpG island 16014
Tssr46796 5 77465462 to 77465481 19 + TSS region transcription start site region 46796
Tssr46797 5 77465483 to 77465496 13 + TSS region transcription start site region 46797
1700017L05Rik 5 77465488 to 77468851 3363 + lincRNA gene RIKEN cDNA 1700017L05 gene
Gm42761 5 77485727 to 77494361 8634 + lincRNA gene predicted gene 42761
D5Mit203 5 77509938 to 77510047 109 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 203
Pea15b 5 77511178 to 77511748 570 - pseudogene phosphoprotein enriched in astrocytes 15B
Gm22011 5 77669724 to 77669846 122 - snoRNA gene predicted gene, 22011
Gm31049 5 77687376 to 77689212 1836 + pseudogene predicted gene, 31049
Gm42673 5 77909124 to 77909460 336 - pseudogene predicted gene 42673
Gm34912 5 77933788 to 77949023 15235 + lncRNA gene predicted gene, 34912