Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:77096810-77142348

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Desp3 5 72775341 to 77098356 4323015 QTL despair 3
Hopx 5 77086988 to 77115121 28133 - protein coding gene HOP homeobox
Tssr46773 5 77097453 to 77097460 7 + TSS region transcription start site region 46773
D5Mit357 5 77098234 to 77098356 122 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 357
Listr1 5 77098234 to 77098356 122 QTL listeriosis resistance 1
Hopxos 5 77098830 to 77102313 3483 + antisense lncRNA gene HOP homeobox, opposite strand
Tssr46774 5 77098860 to 77098875 15 + TSS region transcription start site region 46774
Cpgi16006 5 77114815 to 77115042 227 CpG island CpG island 16006
Tssr51451 5 77114872 to 77114886 14 - TSS region transcription start site region 51451
Tssr51452 5 77114910 to 77114922 12 - TSS region transcription start site region 51452
Tssr51453 5 77115083 to 77115094 11 - TSS region transcription start site region 51453
Tssr51454 5 77115145 to 77115156 11 - TSS region transcription start site region 51454
Gm15831 5 77116810 to 77122348 5538 - lincRNA gene predicted gene 15831
Tssr46775 5 77126684 to 77126701 17 + TSS region transcription start site region 46775
Tssr51455 5 77134530 to 77134534 4 - TSS region transcription start site region 51455
Chaer1 5 77138471 to 77140252 1781 - lincRNA gene cardiac hypertrophy associated epigenetic regulator 1
Tssr51456 5 77140277 to 77140299 22 - TSS region transcription start site region 51456