Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:77061810-77177348

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Desp3 5 72775341 to 77098356 4323015 QTL despair 3
Hopx 5 77086988 to 77115121 28133 - protein coding gene HOP homeobox
Cpgi16005 5 77094655 to 77095669 1014 CpG island CpG island 16005
Tssr51445 5 77095018 to 77095039 21 - TSS region transcription start site region 51445
Tssr51446 5 77095150 to 77095161 11 - TSS region transcription start site region 51446
Tssr51447 5 77095174 to 77095185 11 - TSS region transcription start site region 51447
Tssr51448 5 77095206 to 77095220 14 - TSS region transcription start site region 51448
Tssr51449 5 77095225 to 77095275 50 - TSS region transcription start site region 51449
Tssr1514 5 77095276 to 77095277 1 - TSS region transcription start site region 1514
Tssr51450 5 77095279 to 77095290 11 - TSS region transcription start site region 51450
Tssr46773 5 77097453 to 77097460 7 + TSS region transcription start site region 46773
D5Mit357 5 77098234 to 77098356 122 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 357
Listr1 5 77098234 to 77098356 122 QTL listeriosis resistance 1
Hopxos 5 77098830 to 77102313 3483 + antisense lncRNA gene HOP homeobox, opposite strand
Tssr46774 5 77098860 to 77098875 15 + TSS region transcription start site region 46774
Cpgi16006 5 77114815 to 77115042 227 CpG island CpG island 16006
Tssr51451 5 77114872 to 77114886 14 - TSS region transcription start site region 51451
Tssr51452 5 77114910 to 77114922 12 - TSS region transcription start site region 51452
Tssr51453 5 77115083 to 77115094 11 - TSS region transcription start site region 51453
Tssr51454 5 77115145 to 77115156 11 - TSS region transcription start site region 51454
Gm15831 5 77116810 to 77122348 5538 - lincRNA gene predicted gene 15831
Tssr46775 5 77126684 to 77126701 17 + TSS region transcription start site region 46775
Tssr51455 5 77134530 to 77134534 4 - TSS region transcription start site region 51455
Chaer1 5 77138471 to 77140252 1781 - lincRNA gene cardiac hypertrophy associated epigenetic regulator 1
Tssr51456 5 77140277 to 77140299 22 - TSS region transcription start site region 51456
Gm34598 5 77146097 to 77159173 13076 - lncRNA gene predicted gene, 34598
Tssr51457 5 77158892 to 77158931 39 - TSS region transcription start site region 51457
Cpgi16007 5 77167708 to 77167945 237 CpG island CpG island 16007