Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:76868249-76996578

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C530008M17Rik 5 76657779 to 76873554 215775 + protein coding gene RIKEN cDNA C530008M17 gene
Aasdh 5 76873659 to 76905514 31855 - protein coding gene aminoadipate-semialdehyde dehydrogenase
Cpgi15998 5 76876121 to 76876579 458 CpG island CpG island 15998
D5Mit306 5 76882159 to 76882252 93 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 306
Cpgi15999 5 76905103 to 76905977 874 CpG island CpG island 15999
Tssr51433 5 76905379 to 76905393 14 - TSS region transcription start site region 51433
Tssr51434 5 76905441 to 76905459 18 - TSS region transcription start site region 51434
Tssr51435 5 76905463 to 76905507 44 - TSS region transcription start site region 51435
Ppat 5 76913249 to 76951578 38329 - protein coding gene phosphoribosyl pyrophosphate amidotransferase
Tssr46750 5 76928344 to 76928376 32 + TSS region transcription start site region 46750
2310040G07Rik 5 76928368 to 76947758 19390 + antisense lncRNA gene RIKEN cDNA 2310040G07 gene
Gm42102 5 76931520 to 76938146 6626 + protein coding gene predicted gene, 42102
Cpgi16000 5 76950790 to 76952015 1225 CpG island CpG island 16000
Tssr51436 5 76951160 to 76951174 14 - TSS region transcription start site region 51436
Tssr51437 5 76951178 to 76951198 20 - TSS region transcription start site region 51437
Tssr51438 5 76951207 to 76951232 25 - TSS region transcription start site region 51438
Paics 5 76951308 to 76967507 16199 + protein coding gene phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
Tssr46751 5 76951325 to 76951363 38 + TSS region transcription start site region 46751
Tssr46752 5 76951383 to 76951394 11 + TSS region transcription start site region 46752
Tssr51439 5 76951560 to 76951589 29 - TSS region transcription start site region 51439
Tssr46753 5 76951627 to 76951638 11 + TSS region transcription start site region 46753
Tssr46754 5 76951716 to 76951795 79 + TSS region transcription start site region 46754
Tssr46755 5 76951799 to 76951811 12 + TSS region transcription start site region 46755
Tssr46756 5 76965939 to 76965942 3 + TSS region transcription start site region 46756
Tssr51440 5 76971483 to 76971487 4 - TSS region transcription start site region 51440
Cpgi16001 5 76974357 to 76975284 927 CpG island CpG island 16001
Tssr51441 5 76974593 to 76974636 43 - TSS region transcription start site region 51441
Tssr46757 5 76974692 to 76974727 35 + TSS region transcription start site region 46757
Srp72 5 76974701 to 76999935 25234 + protein coding gene signal recognition particle 72
Tssr46758 5 76995770 to 76995789 19 + TSS region transcription start site region 46758
Tssr46759 5 76995828 to 76995842 14 + TSS region transcription start site region 46759
Tssr46760 5 76995849 to 76995860 11 + TSS region transcription start site region 46760
Tssr46761 5 76995871 to 76995884 13 + TSS region transcription start site region 46761