Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:76117539-76556890

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15990 5 76139926 to 76140977 1051 CpG island CpG island 15990
Srd5a3 5 76140273 to 76155503 15230 + protein coding gene steroid 5 alpha-reductase 3
Tssr46719 5 76140298 to 76140317 19 + TSS region transcription start site region 46719
Tssr46720 5 76140711 to 76140725 14 + TSS region transcription start site region 46720
Gm33832 5 76141835 to 76147678 5843 - lncRNA gene predicted gene, 33832
Gm33938 5 76158260 to 76169219 10959 - lncRNA gene predicted gene, 33938
Tssr51418 5 76182490 to 76182498 8 - TSS region transcription start site region 51418
Tssr51419 5 76182507 to 76182523 16 - TSS region transcription start site region 51419
Cpgi15991 5 76183506 to 76184584 1078 CpG island CpG island 15991
Tssr1513 5 76183804 to 76183829 25 - TSS region transcription start site region 1513
Tmem165 5 76183880 to 76209244 25364 + protein coding gene transmembrane protein 165
Tssr46721 5 76183915 to 76183970 55 + TSS region transcription start site region 46721
Apc-ps1 5 76196625 to 76197094 469 + pseudogene adenomatosis polyposis coli, pseudogene 1
Tssr46722 5 76205863 to 76205878 15 + TSS region transcription start site region 46722
Clock 5 76209868 to 76304792 94924 - protein coding gene circadian locomotor output cycles kaput
Tssr51420 5 76231300 to 76231303 3 - TSS region transcription start site region 51420
Ube2n-ps1 5 76232612 to 76233070 458 - pseudogene ubiquitin-conjugating enzyme E2N, pseudogene 1
Gm43658 5 76297600 to 76301775 4175 - unclassified gene predicted gene 43658
Cpgi15992 5 76303546 to 76305383 1837 CpG island CpG island 15992
Tssr51421 5 76304474 to 76304507 33 - TSS region transcription start site region 51421
Tssr51422 5 76304518 to 76304551 33 - TSS region transcription start site region 51422
Tssr51423 5 76304731 to 76304790 59 - TSS region transcription start site region 51423
Gm7467 5 76304882 to 76305532 650 + antisense lncRNA gene predicted gene 7467
Tssr51424 5 76304956 to 76304993 37 - TSS region transcription start site region 51424
Pdcl2 5 76312116 to 76331156 19040 - protein coding gene phosducin-like 2
Tssr51425 5 76331088 to 76331099 11 - TSS region transcription start site region 51425
Tssr51426 5 76331102 to 76331142 40 - TSS region transcription start site region 51426
Tssr51427 5 76331150 to 76331161 11 - TSS region transcription start site region 51427
Tssr46723 5 76331184 to 76331197 13 + TSS region transcription start site region 46723
4930432L08Rik 5 76332539 to 76341890 9351 + unclassified non-coding RNA gene RIKEN cDNA 4930432L08 gene
Nmu 5 76333495 to 76363777 30282 - protein coding gene neuromedin U
Gm34175 5 76342586 to 76347729 5143 + lncRNA gene predicted gene, 34175
Cpgi15993 5 76363538 to 76364053 515 CpG island CpG island 15993
Tssr51428 5 76363787 to 76363791 4 - TSS region transcription start site region 51428
Gm42666 5 76410354 to 76410505 151 + pseudogene predicted gene 42666
Gm42665 5 76450701 to 76451774 1073 - pseudogene predicted gene 42665
Lmr3b 5 76454954 to 76455133 179 QTL leishmaniasis resistance 3b
D5Mit112 5 76454954 to 76455133 179 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 112
Lmr3a 5 76454954 to 76455133 179 QTL leishmaniasis resistance 3a
Lmr3d 5 76454954 to 76455133 179 QTL leishmaniasis resistance 3d
Lmr3c 5 76454954 to 76455133 179 QTL leishmaniasis resistance 3c
Gm7271 5 76484077 to 76516628 32551 + protein coding gene predicted gene 7271
Cpgi15994 5 76529130 to 76529766 636 CpG island CpG island 15994
Tssr46724 5 76529303 to 76529386 83 + TSS region transcription start site region 46724
Exoc1 5 76529311 to 76570294 40983 + protein coding gene exocyst complex component 1