Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:75808098-76290899

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr51404 5 75828478 to 75828491 13 - TSS region transcription start site region 51404
Tssr46714 5 75830441 to 75830452 11 + TSS region transcription start site region 46714
Tssr46715 5 75830455 to 75830471 16 + TSS region transcription start site region 46715
Tssr46716 5 75830550 to 75830587 37 + TSS region transcription start site region 46716
Gm19590 5 75833035 to 75835645 2610 - lincRNA gene predicted gene, 19590
Tssr51405 5 75835241 to 75835256 15 - TSS region transcription start site region 51405
Cpgi15987 5 75835568 to 75835819 251 CpG island CpG island 15987
Tssr51406 5 75835617 to 75835626 9 - TSS region transcription start site region 51406
Tssr51407 5 75835641 to 75835652 11 - TSS region transcription start site region 51407
Tssr51408 5 75835676 to 75835697 21 - TSS region transcription start site region 51408
Tssr51409 5 75835816 to 75835825 9 - TSS region transcription start site region 51409
Tssr51410 5 75835833 to 75835842 9 - TSS region transcription start site region 51410
Tssr51411 5 75835877 to 75835887 10 - TSS region transcription start site region 51411
Tssr51412 5 75835933 to 75835940 7 - TSS region transcription start site region 51412
Gm38180 5 75846089 to 75848210 2121 + unclassified gene predicted gene, 38180
Gm28865 5 75849238 to 75852958 3720 - lincRNA gene predicted gene 28865
Gm25374 5 75909827 to 75909927 100 + miRNA gene predicted gene, 25374
Kdr 5 75932827 to 75978458 45631 - protein coding gene kinase insert domain protein receptor
Tssr51413 5 75933663 to 75933667 4 - TSS region transcription start site region 51413
Cpgi15988 5 75933747 to 75934049 302 CpG island CpG island 15988
Tssr51414 5 75940790 to 75940794 4 - TSS region transcription start site region 51414
Tssr51415 5 75967668 to 75967707 39 - TSS region transcription start site region 51415
Gm32727 5 75974502 to 76013212 38710 + lncRNA gene predicted gene, 32727
Cpgi15989 5 75977582 to 75978787 1205 CpG island CpG island 15989
Tssr51416 5 75978447 to 75978463 16 - TSS region transcription start site region 51416
Tssr51417 5 75979215 to 75979221 6 - TSS region transcription start site region 51417
Tssr46717 5 75981222 to 75981245 23 + TSS region transcription start site region 46717
D5Mit307 5 76000267 to 76000386 119 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 307
Gm24738 5 76006319 to 76006441 122 - rRNA gene predicted gene, 24738
Tssr46718 5 76016385 to 76016393 8 + TSS region transcription start site region 46718
Gm32780 5 76043098 to 76055899 12801 + lincRNA gene predicted gene, 32780
D5Mit202 5 76056430 to 76056578 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 202
Gm6051 5 76060412 to 76060763 351 - pseudogene predicted gene 6051
Cpgi15990 5 76139926 to 76140977 1051 CpG island CpG island 15990
Srd5a3 5 76140273 to 76155503 15230 + protein coding gene steroid 5 alpha-reductase 3
Tssr46719 5 76140298 to 76140317 19 + TSS region transcription start site region 46719
Tssr46720 5 76140711 to 76140725 14 + TSS region transcription start site region 46720
Gm33832 5 76141835 to 76147678 5843 - lncRNA gene predicted gene, 33832
Gm33938 5 76158260 to 76169219 10959 - lncRNA gene predicted gene, 33938
Tssr51418 5 76182490 to 76182498 8 - TSS region transcription start site region 51418
Tssr51419 5 76182507 to 76182523 16 - TSS region transcription start site region 51419
Cpgi15991 5 76183506 to 76184584 1078 CpG island CpG island 15991
Tssr1513 5 76183804 to 76183829 25 - TSS region transcription start site region 1513
Tmem165 5 76183880 to 76209244 25364 + protein coding gene transmembrane protein 165
Tssr46721 5 76183915 to 76183970 55 + TSS region transcription start site region 46721
Apc-ps1 5 76196625 to 76197094 469 + pseudogene adenomatosis polyposis coli, pseudogene 1
Tssr46722 5 76205863 to 76205878 15 + TSS region transcription start site region 46722
Clock 5 76209868 to 76304792 94924 - protein coding gene circadian locomotor output cycles kaput
Tssr51420 5 76231300 to 76231303 3 - TSS region transcription start site region 51420
Ube2n-ps1 5 76232612 to 76233070 458 - pseudogene ubiquitin-conjugating enzyme E2N, pseudogene 1