Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
D5Dcr49 | 5 | 95 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 49 | ||
D5Dcr50 | 5 | 95 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 50 | ||
Gm24502 | 5 | 104 | - | snRNA gene | predicted gene, 24502 | |
Tssr51403 | 5 | 7 | - | TSS region | transcription start site region 51403 | |
Cpgi15985 | 5 | 1618 | CpG island | CpG island 15985 | ||
Tssr46701 | 5 | 15 | + | TSS region | transcription start site region 46701 | |
Kit | 5 | 81735 | + | protein coding gene | KIT proto-oncogene receptor tyrosine kinase | |
l5H1 | 5 | 22702043 | heritable phenotypic marker | lethal, Chr 5, Harwell 1 | ||
Tssr46702 | 5 | 7 | + | TSS region | transcription start site region 46702 | |
Tssr46703 | 5 | 9 | + | TSS region | transcription start site region 46703 | |
Tssr46704 | 5 | 39 | + | TSS region | transcription start site region 46704 | |
Tssr46705 | 5 | 4 | + | TSS region | transcription start site region 46705 | |
Tssr46706 | 5 | 9 | + | TSS region | transcription start site region 46706 | |
Tssr46707 | 5 | 3 | + | TSS region | transcription start site region 46707 | |
Tssr46708 | 5 | 5 | + | TSS region | transcription start site region 46708 | |
Tssr46709 | 5 | 29 | + | TSS region | transcription start site region 46709 | |
Tssr46710 | 5 | 1 | + | TSS region | transcription start site region 46710 | |
Tssr46711 | 5 | 7 | + | TSS region | transcription start site region 46711 | |
Gm32558 | 5 | 12947 | + | lncRNA gene | predicted gene, 32558 | |
Gm43101 | 5 | 8362 | + | lincRNA gene | predicted gene 43101 | |
Cpgi15986 | 5 | 232 | CpG island | CpG island 15986 | ||
Tssr46712 | 5 | 17 | + | TSS region | transcription start site region 46712 | |
Tssr46713 | 5 | 16 | + | TSS region | transcription start site region 46713 | |
Gm43102 | 5 | 2323 | + | unclassified gene | predicted gene 43102 | |
Gm43100 | 5 | 5330 | - | lincRNA gene | predicted gene 43100 | |
Tssr51404 | 5 | 13 | - | TSS region | transcription start site region 51404 | |
Tssr46714 | 5 | 11 | + | TSS region | transcription start site region 46714 | |
Tssr46715 | 5 | 16 | + | TSS region | transcription start site region 46715 | |
Tssr46716 | 5 | 37 | + | TSS region | transcription start site region 46716 | |
Gm19590 | 5 | 2610 | - | lincRNA gene | predicted gene, 19590 | |
Tssr51405 | 5 | 15 | - | TSS region | transcription start site region 51405 | |
Cpgi15987 | 5 | 251 | CpG island | CpG island 15987 | ||
Tssr51406 | 5 | 9 | - | TSS region | transcription start site region 51406 | |
Tssr51407 | 5 | 11 | - | TSS region | transcription start site region 51407 | |
Tssr51408 | 5 | 21 | - | TSS region | transcription start site region 51408 | |
Tssr51409 | 5 | 9 | - | TSS region | transcription start site region 51409 | |
Tssr51410 | 5 | 9 | - | TSS region | transcription start site region 51410 | |
Tssr51411 | 5 | 10 | - | TSS region | transcription start site region 51411 | |
Tssr51412 | 5 | 7 | - | TSS region | transcription start site region 51412 | |
Gm38180 | 5 | 2121 | + | unclassified gene | predicted gene, 38180 | |
Gm28865 | 5 | 3720 | - | lincRNA gene | predicted gene 28865 | |
Gm25374 | 5 | 100 | + | miRNA gene | predicted gene, 25374 | |
Kdr | 5 | 45631 | - | protein coding gene | kinase insert domain protein receptor | |
Tssr51413 | 5 | 4 | - | TSS region | transcription start site region 51413 | |
Cpgi15988 | 5 | 302 | CpG island | CpG island 15988 | ||
Tssr51414 | 5 | 4 | - | TSS region | transcription start site region 51414 | |
Tssr51415 | 5 | 39 | - | TSS region | transcription start site region 51415 | |
Gm32727 | 5 | 38710 | + | lncRNA gene | predicted gene, 32727 | |
Cpgi15989 | 5 | 1205 | CpG island | CpG island 15989 | ||
Tssr51416 | 5 | 16 | - | TSS region | transcription start site region 51416 | |
Tssr51417 | 5 | 6 | - | TSS region | transcription start site region 51417 | |
Tssr46717 | 5 | 23 | + | TSS region | transcription start site region 46717 | |
D5Mit307 | 5 | 119 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 307 | ||
Gm24738 | 5 | 122 | - | rRNA gene | predicted gene, 24738 | |
Tssr46718 | 5 | 8 | + | TSS region | transcription start site region 46718 | |
Gm32780 | 5 | 12801 | + | lincRNA gene | predicted gene, 32780 | |
D5Mit202 | 5 | 148 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 202 | ||
Gm6051 | 5 | 351 | - | pseudogene | predicted gene 6051 | |
Cpgi15990 | 5 | 1051 | CpG island | CpG island 15990 | ||
Srd5a3 | 5 | 15230 | + | protein coding gene | steroid 5 alpha-reductase 3 | |
Tssr46719 | 5 | 19 | + | TSS region | transcription start site region 46719 | |
Tssr46720 | 5 | 14 | + | TSS region | transcription start site region 46720 | |
Gm33832 | 5 | 5843 | - | lncRNA gene | predicted gene, 33832 | |
Gm33938 | 5 | 10959 | - | lncRNA gene | predicted gene, 33938 | |
Tssr51418 | 5 | 8 | - | TSS region | transcription start site region 51418 | |
Tssr51419 | 5 | 16 | - | TSS region | transcription start site region 51419 | |
Cpgi15991 | 5 | 1078 | CpG island | CpG island 15991 | ||
Tssr1513 | 5 | 25 | - | TSS region | transcription start site region 1513 | |
Tmem165 | 5 | 25364 | + | protein coding gene | transmembrane protein 165 | |
Tssr46721 | 5 | 55 | + | TSS region | transcription start site region 46721 | |
Apc-ps1 | 5 | 469 | + | pseudogene | adenomatosis polyposis coli, pseudogene 1 | |
Tssr46722 | 5 | 15 | + | TSS region | transcription start site region 46722 | |
Clock | 5 | 94924 | - | protein coding gene | circadian locomotor output cycles kaput | |
Tssr51420 | 5 | 3 | - | TSS region | transcription start site region 51420 | |
Ube2n-ps1 | 5 | 458 | - | pseudogene | ubiquitin-conjugating enzyme E2N, pseudogene 1 | |
Gm43658 | 5 | 4175 | - | unclassified gene | predicted gene 43658 | |
Cpgi15992 | 5 | 1837 | CpG island | CpG island 15992 | ||
Tssr51421 | 5 | 33 | - | TSS region | transcription start site region 51421 | |
Tssr51422 | 5 | 33 | - | TSS region | transcription start site region 51422 | |
Tssr51423 | 5 | 59 | - | TSS region | transcription start site region 51423 | |
Gm7467 | 5 | 650 | + | antisense lncRNA gene | predicted gene 7467 | |
Tssr51424 | 5 | 37 | - | TSS region | transcription start site region 51424 | |
Pdcl2 | 5 | 19040 | - | protein coding gene | phosducin-like 2 | |
Tssr51425 | 5 | 11 | - | TSS region | transcription start site region 51425 | |
Tssr51426 | 5 | 40 | - | TSS region | transcription start site region 51426 | |
Tssr51427 | 5 | 11 | - | TSS region | transcription start site region 51427 | |
Tssr46723 | 5 | 13 | + | TSS region | transcription start site region 46723 | |
4930432L08Rik | 5 | 9351 | + | unclassified non-coding RNA gene | RIKEN cDNA 4930432L08 gene | |
Nmu | 5 | 30282 | - | protein coding gene | neuromedin U | |
Gm34175 | 5 | 5143 | + | lncRNA gene | predicted gene, 34175 | |
Cpgi15993 | 5 | 515 | CpG island | CpG island 15993 | ||
Tssr51428 | 5 | 4 | - | TSS region | transcription start site region 51428 | |
Gm42666 | 5 | 151 | + | pseudogene | predicted gene 42666 | |
Gm42665 | 5 | 1073 | - | pseudogene | predicted gene 42665 | |
Lmr3d | 5 | 179 | QTL | leishmaniasis resistance 3d | ||
Lmr3b | 5 | 179 | QTL | leishmaniasis resistance 3b | ||
Lmr3a | 5 | 179 | QTL | leishmaniasis resistance 3a | ||
Lmr3c | 5 | 179 | QTL | leishmaniasis resistance 3c | ||
D5Mit112 | 5 | 179 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 112 | ||
Gm7271 | 5 | 32551 | + | protein coding gene | predicted gene 7271 | |
Cpgi15994 | 5 | 636 | CpG island | CpG island 15994 | ||
Tssr46724 | 5 | 83 | + | TSS region | transcription start site region 46724 | |
Exoc1 | 5 | 40983 | + | protein coding gene | exocyst complex component 1 | |
Cpgi15995 | 5 | 903 | CpG island | CpG island 15995 | ||
Tssr46725 | 5 | 79 | + | TSS region | transcription start site region 46725 | |
Cep135 | 5 | 57768 | + | protein coding gene | centrosomal protein 135 | |
Tssr46726 | 5 | 16 | + | TSS region | transcription start site region 46726 | |
Tssr46727 | 5 | 22 | + | TSS region | transcription start site region 46727 | |
A730089K16Rik | 5 | 2426 | - | unclassified gene | RIKEN cDNA A730089K16 gene | |
Cpgi15996 | 5 | 1183 | CpG island | CpG island 15996 | ||
Tssr46728 | 5 | 20 | + | TSS region | transcription start site region 46728 | |
Tssr46729 | 5 | 49 | + | TSS region | transcription start site region 46729 | |
Tssr46730 | 5 | 5 | + | TSS region | transcription start site region 46730 | |
Tssr46731 | 5 | 11 | + | TSS region | transcription start site region 46731 | |
C530008M17Rik | 5 | 215775 | + | protein coding gene | RIKEN cDNA C530008M17 gene | |
Tssr51429 | 5 | 26 | - | TSS region | transcription start site region 51429 | |
Tssr51430 | 5 | 24 | - | TSS region | transcription start site region 51430 | |
Tssr51431 | 5 | 29 | - | TSS region | transcription start site region 51431 | |
Tssr46732 | 5 | 36 | + | TSS region | transcription start site region 46732 | |
Tssr46733 | 5 | 5 | + | TSS region | transcription start site region 46733 | |
Tssr46734 | 5 | 10 | + | TSS region | transcription start site region 46734 | |
Mdq16 | 5 | 0 | QTL | mammary ductal QTL 16 | ||
Gm7494 | 5 | 440 | - | pseudogene | predicted gene 7494 | |
Gm34369 | 5 | 2619 | - | lncRNA gene | predicted gene, 34369 | |
Tssr46735 | 5 | 16 | + | TSS region | transcription start site region 46735 | |
Tssr46736 | 5 | 46 | + | TSS region | transcription start site region 46736 | |
Tssr46737 | 5 | 45 | + | TSS region | transcription start site region 46737 | |
Tssr46738 | 5 | 64 | + | TSS region | transcription start site region 46738 | |
Tssr46739 | 5 | 8 | + | TSS region | transcription start site region 46739 | |
Tssr46740 | 5 | 11 | + | TSS region | transcription start site region 46740 | |
Tssr46741 | 5 | 17 | + | TSS region | transcription start site region 46741 | |
Tssr46742 | 5 | 14 | + | TSS region | transcription start site region 46742 | |
Tssr46743 | 5 | 40 | + | TSS region | transcription start site region 46743 | |
Tssr46744 | 5 | 11 | + | TSS region | transcription start site region 46744 | |
Tssr46745 | 5 | 1 | + | TSS region | transcription start site region 46745 | |
Cpgi15997 | 5 | 2315 | CpG island | CpG island 15997 | ||
Tssr46746 | 5 | 16 | + | TSS region | transcription start site region 46746 | |
Tssr46747 | 5 | 17 | + | TSS region | transcription start site region 46747 | |
Tssr51432 | 5 | 16 | - | TSS region | transcription start site region 51432 | |
Tssr46748 | 5 | 14 | + | TSS region | transcription start site region 46748 | |
Tssr46749 | 5 | 12 | + | TSS region | transcription start site region 46749 | |
Aasdh | 5 | 31855 | - | protein coding gene | aminoadipate-semialdehyde dehydrogenase | |
Cpgi15998 | 5 | 458 | CpG island | CpG island 15998 | ||
D5Mit306 | 5 | 93 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 306 | ||
Cpgi15999 | 5 | 874 | CpG island | CpG island 15999 | ||
Tssr51433 | 5 | 14 | - | TSS region | transcription start site region 51433 | |
Tssr51434 | 5 | 18 | - | TSS region | transcription start site region 51434 | |
Tssr51435 | 5 | 44 | - | TSS region | transcription start site region 51435 | |
Ppat | 5 | 38329 | - | protein coding gene | phosphoribosyl pyrophosphate amidotransferase | |
Tssr46750 | 5 | 32 | + | TSS region | transcription start site region 46750 | |
2310040G07Rik | 5 | 19390 | + | antisense lncRNA gene | RIKEN cDNA 2310040G07 gene | |
Gm42102 | 5 | 6626 | + | protein coding gene | predicted gene, 42102 |