Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:75187775-75599372

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdgfra 5 75152292 to 75198215 45923 + protein coding gene platelet derived growth factor receptor, alpha polypeptide
Cpgi15984 5 75195042 to 75195321 279 CpG island CpG island 15984
Tssr46699 5 75203722 to 75203726 4 + TSS region transcription start site region 46699
Gm42799 5 75246443 to 75246770 327 + pseudogene predicted gene 42799
Gm18345 5 75342443 to 75343832 1389 + pseudogene predicted gene, 18345
Gm22084 5 75372041 to 75372145 104 - snRNA gene predicted gene, 22084
Tssr46700 5 75378947 to 75378970 23 + TSS region transcription start site region 46700
Gm42800 5 75387775 to 75399372 11597 - lincRNA gene predicted gene 42800
D5Dcr49 5 75439833 to 75439928 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 49
D5Dcr50 5 75480119 to 75480214 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 50
Gm24502 5 75561046 to 75561150 104 - snRNA gene predicted gene, 24502
Tssr51403 5 75569911 to 75569918 7 - TSS region transcription start site region 51403
Cpgi15985 5 75574450 to 75576068 1618 CpG island CpG island 15985
Tssr46701 5 75574986 to 75575001 15 + TSS region transcription start site region 46701
l5H1 5 75574987 to 98277030 22702043 heritable phenotypic marker lethal, Chr 5, Harwell 1
Kit 5 75574987 to 75656722 81735 + protein coding gene KIT proto-oncogene receptor tyrosine kinase
Tssr46702 5 75576094 to 75576101 7 + TSS region transcription start site region 46702
Tssr46703 5 75590325 to 75590334 9 + TSS region transcription start site region 46703