Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:74062710-74462722

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Usp46	5	73998726 to 74068411	69685	-	protein coding gene	ubiquitin specific peptidase 46
Tssr51377	5	74065662 to 74065675	13	-	TSS region	transcription start site region 51377
Tssr51378	5	74065736 to 74065758	22	-	TSS region	transcription start site region 51378
Cpgi15967	5	74067855 to 74068937	1082		CpG island	CpG island 15967
Tssr51379	5	74068336 to 74068350	14	-	TSS region	transcription start site region 51379
Tssr51380	5	74068361 to 74068438	77	-	TSS region	transcription start site region 51380
Gm43416	5	74092137 to 74093151	1014	-	unclassified gene	predicted gene 43416
Cpgi15968	5	74092801 to 74093557	756		CpG island	CpG island 15968
Tssr46666	5	74093061 to 74093072	11	+	TSS region	transcription start site region 46666
Tssr46667	5	74093075 to 74093100	25	+	TSS region	transcription start site region 46667
Dancr	5	74093083 to 74094336	1253	+	lncRNA gene	differentiation antagonizing non-protein coding RNA
Tssr46668	5	74093112 to 74093129	17	+	TSS region	transcription start site region 46668
Tssr46669	5	74093132 to 74093139	7	+	TSS region	transcription start site region 46669
Snora26	5	74093530 to 74093650	120	+	snoRNA gene	small nucleolar RNA, H/ACA box 26
Cpgi15969	5	74126426 to 74126672	246		CpG island	CpG island 15969
Gm32002	5	74160683 to 74165284	4601	+	lncRNA gene	predicted gene, 32002
A330058E17Rik	5	74172161 to 74176050	3889	-	unclassified gene	RIKEN cDNA A330058E17 gene
Cpgi15970	5	74194675 to 74195946	1271		CpG island	CpG island 15970
Tssr46670	5	74195281 to 74195294	13	+	TSS region	transcription start site region 46670
Rasl11b	5	74195326 to 74199477	4151	+	protein coding gene	RAS-like, family 11, member B
D5Buc50	5	74202136 to 74202410	274		DNA segment	DNA segment, Chr 5, Bucan 50
Scfd2	5	74204816 to 74531742	326926	-	protein coding gene	Sec1 family domain containing 2
D5Buc51	5	74236964 to 74237184	220		DNA segment	DNA segment, Chr 5, Bucan 51
Gm42599	5	74249148 to 74249616	468	-	unclassified gene	predicted gene 42599
Tssr51381	5	74262684 to 74262707	23	-	TSS region	transcription start site region 51381
Tssr51382	5	74262710 to 74262722	12	-	TSS region	transcription start site region 51382
Gm32064	5	74309332 to 74359666	50334	+	lncRNA gene	predicted gene, 32064
Gm15981	5	74316578 to 74317034	456	-	pseudogene	predicted gene 15981
Tssr46671	5	74337702 to 74337709	7	+	TSS region	transcription start site region 46671
Gm15982	5	74356583 to 74358419	1836	-	pseudogene	predicted gene 15982
6720475M21Rik	5	74367163 to 74369915	2752	-	unclassified gene	RIKEN cDNA 6720475M21 gene
Tssr46672	5	74386432 to 74386435	3	+	TSS region	transcription start site region 46672
Tssr51383	5	74395644 to 74395647	3	-	TSS region	transcription start site region 51383
Tssr46673	5	74402992 to 74402998	6	+	TSS region	transcription start site region 46673
Tssr51384	5	74405095 to 74405132	37	-	TSS region	transcription start site region 51384
Gm43167	5	74429500 to 74431105	1605	-	unclassified gene	predicted gene 43167
D5Jcs311	5	74435247 to 74435470	223		DNA segment	DNA segment, Chr 5, John C. Schimenti 311
Recrq8	5	132500000 to 74300000	-58200000		QTL	recombination rate in male meiosis QTL 8