Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:73801379-74091389

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34960 5 73797525 to 73804674 7149 - lncRNA gene predicted gene, 34960
Cpgi15965 5 73822272 to 73822603 331 CpG island CpG island 15965
1700019F05Rik 5 73912896 to 73920421 7525 + lincRNA gene RIKEN cDNA 1700019F05 gene
D5B6CS40 5 73914563 to 73914732 169 DNA segment DNA segment, Chr 5, B6CS 40
D5Jcs309 5 73941688 to 73941910 222 DNA segment DNA segment, Chr 5, John C. Schimenti 309
Tssr46660 5 73946379 to 73946389 10 + TSS region transcription start site region 46660
C78283 5 73946381 to 73948376 1995 + lincRNA gene expressed sequence C78283
Tssr46661 5 73946902 to 73946909 7 + TSS region transcription start site region 46661
Tssr46662 5 73972814 to 73972817 3 + TSS region transcription start site region 46662
D5Jcs310 5 73990150 to 73990397 247 DNA segment DNA segment, Chr 5, John C. Schimenti 310
Usp46 5 73998726 to 74068411 69685 - protein coding gene ubiquitin specific peptidase 46
Tssr1509 5 74009028 to 74009042 14 - TSS region transcription start site region 1509
Tssr51374 5 74009169 to 74009189 20 - TSS region transcription start site region 51374
Tssr51375 5 74009425 to 74009465 40 - TSS region transcription start site region 51375
Usp46os1 5 74013381 to 74015335 1954 + antisense lncRNA gene ubiquitin specific peptidase 46, opposite strand 1
Tssr46663 5 74014195 to 74014209 14 + TSS region transcription start site region 46663
Tssr46664 5 74014211 to 74014226 15 + TSS region transcription start site region 46664
Tssr1510 5 74029210 to 74029221 11 - TSS region transcription start site region 1510
Tssr51376 5 74029238 to 74029262 24 - TSS region transcription start site region 51376
Cpgi15966 5 74032215 to 74032709 494 CpG island CpG island 15966
Tssr46665 5 74032264 to 74032273 9 + TSS region transcription start site region 46665
Usp46os2 5 74035742 to 74043285 7543 + lncRNA gene ubiquitin specific peptidase 46, opposite strand 2
Gm43417 5 74048299 to 74053505 5206 - unclassified gene predicted gene 43417
Gm43415 5 74060038 to 74060787 749 + unclassified gene predicted gene 43415
Tssr51377 5 74065662 to 74065675 13 - TSS region transcription start site region 51377
Tssr51378 5 74065736 to 74065758 22 - TSS region transcription start site region 51378
Cpgi15967 5 74067855 to 74068937 1082 CpG island CpG island 15967
Tssr51379 5 74068336 to 74068350 14 - TSS region transcription start site region 51379
Tssr51380 5 74068361 to 74068438 77 - TSS region transcription start site region 51380