Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
D5Mit58 | 5 | 114 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 58 | ||
Cpgi15956 | 5 | 740 | CpG island | CpG island 15956 | ||
Ociad1 | 5 | 21285 | + | protein coding gene | OCIA domain containing 1 | |
Tssr46636 | 5 | 25 | + | TSS region | transcription start site region 46636 | |
Tssr46637 | 5 | 25 | + | TSS region | transcription start site region 46637 | |
Tssr1508 | 5 | 11 | + | TSS region | transcription start site region 1508 | |
Tssr46638 | 5 | 3 | + | TSS region | transcription start site region 46638 | |
Tssr46639 | 5 | 24 | + | TSS region | transcription start site region 46639 | |
Tssr46640 | 5 | 13 | + | TSS region | transcription start site region 46640 | |
Gm42733 | 5 | 518 | - | unclassified gene | predicted gene 42733 | |
Gm42732 | 5 | 1196 | + | unclassified gene | predicted gene 42732 | |
Ociad2 | 5 | 16749 | - | protein coding gene | OCIA domain containing 2 | |
Cpgi15957 | 5 | 749 | CpG island | CpG island 15957 | ||
Tssr51364 | 5 | 22 | - | TSS region | transcription start site region 51364 | |
Tssr51365 | 5 | 60 | - | TSS region | transcription start site region 51365 | |
Cpgi15958 | 5 | 152 | CpG island | CpG island 15958 | ||
Tssr51366 | 5 | 32 | - | TSS region | transcription start site region 51366 | |
Tssr51367 | 5 | 6 | - | TSS region | transcription start site region 51367 | |
Gm34496 | 5 | 15072 | + | lncRNA gene | predicted gene, 34496 | |
Tssr46641 | 5 | 16 | + | TSS region | transcription start site region 46641 | |
Gm34583 | 5 | 10542 | + | lncRNA gene | predicted gene, 34583 | |
Tssr46642 | 5 | 10 | + | TSS region | transcription start site region 46642 | |
Gm35960 | 5 | 1014 | - | pseudogene | predicted gene, 35960 | |
Cpgi15959 | 5 | 665 | CpG island | CpG island 15959 | ||
Cwh43 | 5 | 47360 | + | protein coding gene | cell wall biogenesis 43 C-terminal homolog | |
Tssr46643 | 5 | 50 | + | TSS region | transcription start site region 46643 | |
Gm43798 | 5 | 393 | - | unclassified gene | predicted gene 43798 | |
Gm15653 | 5 | 906 | - | pseudogene | predicted gene 15653 | |
Tssr46644 | 5 | 15 | + | TSS region | transcription start site region 46644 | |
Dcun1d4 | 5 | 79767 | + | protein coding gene | DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) | |
Tssr46645 | 5 | 11 | + | TSS region | transcription start site region 46645 | |
Cpgi15960 | 5 | 2241 | CpG island | CpG island 15960 | ||
Tssr46646 | 5 | 65 | + | TSS region | transcription start site region 46646 | |
Tssr46647 | 5 | 13 | + | TSS region | transcription start site region 46647 | |
Tssr46648 | 5 | 9 | + | TSS region | transcription start site region 46648 | |
Tssr46649 | 5 | 16 | + | TSS region | transcription start site region 46649 | |
Tssr46650 | 5 | 11 | + | TSS region | transcription start site region 46650 | |
Tssr46651 | 5 | 11 | + | TSS region | transcription start site region 46651 | |
Tssr46652 | 5 | 22 | + | TSS region | transcription start site region 46652 | |
Tssr46653 | 5 | 5 | + | TSS region | transcription start site region 46653 | |
Tssr46654 | 5 | 32 | + | TSS region | transcription start site region 46654 | |
Lrrc66 | 5 | 25779 | - | protein coding gene | leucine rich repeat containing 66 | |
Tssr51368 | 5 | 40 | - | TSS region | transcription start site region 51368 | |
Tssr51369 | 5 | 14 | - | TSS region | transcription start site region 51369 | |
Tssr46655 | 5 | 2 | + | TSS region | transcription start site region 46655 | |
Tssr51370 | 5 | 13 | - | TSS region | transcription start site region 51370 | |
Sgcb | 5 | 14982 | - | protein coding gene | sarcoglycan, beta (dystrophin-associated glycoprotein) | |
Gm43799 | 5 | 578 | - | unclassified gene | predicted gene 43799 | |
Cpgi15961 | 5 | 776 | CpG island | CpG island 15961 | ||
Tssr51371 | 5 | 7 | - | TSS region | transcription start site region 51371 | |
Tssr51372 | 5 | 34 | - | TSS region | transcription start site region 51372 | |
Cpgi15962 | 5 | 1125 | CpG island | CpG island 15962 | ||
Gm34902 | 5 | 1490 | - | lncRNA gene | predicted gene, 34902 | |
Tssr46656 | 5 | 13 | + | TSS region | transcription start site region 46656 | |
Tssr46657 | 5 | 23 | + | TSS region | transcription start site region 46657 | |
Spata18 | 5 | 28119 | + | protein coding gene | spermatogenesis associated 18 | |
Tssr46658 | 5 | 18 | + | TSS region | transcription start site region 46658 | |
Tssr51373 | 5 | 37 | - | TSS region | transcription start site region 51373 | |
Tssr46659 | 5 | 48 | + | TSS region | transcription start site region 46659 | |
Cpgi15963 | 5 | 515 | CpG island | CpG island 15963 | ||
Cpgi15964 | 5 | 205 | CpG island | CpG island 15964 | ||
Gm34960 | 5 | 7149 | - | lncRNA gene | predicted gene, 34960 | |
Cpgi15965 | 5 | 331 | CpG island | CpG island 15965 | ||
1700019F05Rik | 5 | 7525 | + | lincRNA gene | RIKEN cDNA 1700019F05 gene | |
D5B6CS40 | 5 | 169 | DNA segment | DNA segment, Chr 5, B6CS 40 | ||
D5Jcs309 | 5 | 222 | DNA segment | DNA segment, Chr 5, John C. Schimenti 309 | ||
Tssr46660 | 5 | 10 | + | TSS region | transcription start site region 46660 | |
C78283 | 5 | 1995 | + | lincRNA gene | expressed sequence C78283 | |
Tssr46661 | 5 | 7 | + | TSS region | transcription start site region 46661 | |
Tssr46662 | 5 | 3 | + | TSS region | transcription start site region 46662 | |
D5Jcs310 | 5 | 247 | DNA segment | DNA segment, Chr 5, John C. Schimenti 310 | ||
Usp46 | 5 | 69685 | - | protein coding gene | ubiquitin specific peptidase 46 | |
Tssr1509 | 5 | 14 | - | TSS region | transcription start site region 1509 | |
Tssr51374 | 5 | 20 | - | TSS region | transcription start site region 51374 | |
Tssr51375 | 5 | 40 | - | TSS region | transcription start site region 51375 | |
Usp46os1 | 5 | 1954 | + | antisense lncRNA gene | ubiquitin specific peptidase 46, opposite strand 1 | |
Tssr46663 | 5 | 14 | + | TSS region | transcription start site region 46663 | |
Tssr46664 | 5 | 15 | + | TSS region | transcription start site region 46664 | |
Tssr1510 | 5 | 11 | - | TSS region | transcription start site region 1510 | |
Tssr51376 | 5 | 24 | - | TSS region | transcription start site region 51376 | |
Cpgi15966 | 5 | 494 | CpG island | CpG island 15966 | ||
Tssr46665 | 5 | 9 | + | TSS region | transcription start site region 46665 | |
Usp46os2 | 5 | 7543 | + | lncRNA gene | ubiquitin specific peptidase 46, opposite strand 2 | |
Gm43417 | 5 | 5206 | - | unclassified gene | predicted gene 43417 | |
Gm43415 | 5 | 749 | + | unclassified gene | predicted gene 43415 | |
Tssr51377 | 5 | 13 | - | TSS region | transcription start site region 51377 | |
Tssr51378 | 5 | 22 | - | TSS region | transcription start site region 51378 | |
Cpgi15967 | 5 | 1082 | CpG island | CpG island 15967 | ||
Tssr51379 | 5 | 14 | - | TSS region | transcription start site region 51379 | |
Tssr51380 | 5 | 77 | - | TSS region | transcription start site region 51380 | |
Gm43416 | 5 | 1014 | - | unclassified gene | predicted gene 43416 | |
Cpgi15968 | 5 | 756 | CpG island | CpG island 15968 | ||
Tssr46666 | 5 | 11 | + | TSS region | transcription start site region 46666 | |
Tssr46667 | 5 | 25 | + | TSS region | transcription start site region 46667 | |
Dancr | 5 | 1253 | + | lncRNA gene | differentiation antagonizing non-protein coding RNA | |
Tssr46668 | 5 | 17 | + | TSS region | transcription start site region 46668 | |
Tssr46669 | 5 | 7 | + | TSS region | transcription start site region 46669 | |
Snora26 | 5 | 120 | + | snoRNA gene | small nucleolar RNA, H/ACA box 26 | |
Cpgi15969 | 5 | 246 | CpG island | CpG island 15969 | ||
Gm32002 | 5 | 4601 | + | lncRNA gene | predicted gene, 32002 | |
A330058E17Rik | 5 | 3889 | - | unclassified gene | RIKEN cDNA A330058E17 gene | |
Cpgi15970 | 5 | 1271 | CpG island | CpG island 15970 | ||
Tssr46670 | 5 | 13 | + | TSS region | transcription start site region 46670 | |
Rasl11b | 5 | 4151 | + | protein coding gene | RAS-like, family 11, member B | |
D5Buc50 | 5 | 274 | DNA segment | DNA segment, Chr 5, Bucan 50 | ||
Scfd2 | 5 | 326926 | - | protein coding gene | Sec1 family domain containing 2 | |
D5Buc51 | 5 | 220 | DNA segment | DNA segment, Chr 5, Bucan 51 | ||
Gm42599 | 5 | 468 | - | unclassified gene | predicted gene 42599 | |
Tssr51381 | 5 | 23 | - | TSS region | transcription start site region 51381 | |
Tssr51382 | 5 | 12 | - | TSS region | transcription start site region 51382 | |
Gm32064 | 5 | 50334 | + | lncRNA gene | predicted gene, 32064 | |
Gm15981 | 5 | 456 | - | pseudogene | predicted gene 15981 | |
Tssr46671 | 5 | 7 | + | TSS region | transcription start site region 46671 | |
Gm15982 | 5 | 1836 | - | pseudogene | predicted gene 15982 | |
6720475M21Rik | 5 | 2752 | - | unclassified gene | RIKEN cDNA 6720475M21 gene | |
Tssr46672 | 5 | 3 | + | TSS region | transcription start site region 46672 | |
Tssr51383 | 5 | 3 | - | TSS region | transcription start site region 51383 | |
Tssr46673 | 5 | 6 | + | TSS region | transcription start site region 46673 | |
Tssr51384 | 5 | 37 | - | TSS region | transcription start site region 51384 | |
Gm43167 | 5 | 1605 | - | unclassified gene | predicted gene 43167 | |
D5Jcs311 | 5 | 223 | DNA segment | DNA segment, Chr 5, John C. Schimenti 311 | ||
D5B6CS103 | 5 | 166 | DNA segment | DNA segment, Chr 5, B6CS 103 | ||
Cpgi15971 | 5 | 1164 | CpG island | CpG island 15971 | ||
Tssr51385 | 5 | 88 | - | TSS region | transcription start site region 51385 | |
Cpgi15972 | 5 | 842 | CpG island | CpG island 15972 | ||
Fip1l1 | 5 | 63351 | + | protein coding gene | FIP1 like 1 (S. cerevisiae) | |
Tssr46674 | 5 | 58 | + | TSS region | transcription start site region 46674 | |
Tssr46675 | 5 | 23 | + | TSS region | transcription start site region 46675 | |
Tssr46676 | 5 | 50 | + | TSS region | transcription start site region 46676 | |
Tssr46677 | 5 | 17 | + | TSS region | transcription start site region 46677 | |
Gm43747 | 5 | 1329 | + | unclassified gene | predicted gene 43747 | |
Tssr46678 | 5 | 3 | + | TSS region | transcription start site region 46678 | |
Tssr46679 | 5 | 4 | + | TSS region | transcription start site region 46679 | |
Lnx1 | 5 | 110465 | - | protein coding gene | ligand of numb-protein X 1 | |
Tssr46680 | 5 | 1 | + | TSS region | transcription start site region 46680 | |
D5Jcs312 | 5 | 196 | DNA segment | DNA segment, Chr 5, John C. Schimenti 312 | ||
Gm32304 | 5 | 10693 | + | lncRNA gene | predicted gene, 32304 | |
Tssr1511 | 5 | 51 | + | TSS region | transcription start site region 1511 | |
Recrq8 | 5 | -58200000 | QTL | recombination rate in male meiosis QTL 8 |