Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:72404189-72604200

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Corin 5 72300025 to 72504473 204448 - protein coding gene corin, serine peptidase
D5Mit305 5 72409248 to 72409344 96 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 305
Gm19560 5 72409444 to 72409957 513 + pseudogene predicted gene, 19560
Tssr51297 5 72417717 to 72417728 11 - TSS region transcription start site region 51297
Gm23712 5 72418713 to 72418819 106 - snRNA gene predicted gene, 23712
D5Buc20 5 72425281 to 72425562 281 DNA segment DNA segment, Chr 5, Bucan 20
Ahl13 5 72488531 to 72488652 121 QTL age related hearing loss, early onset 13
D5Mit336 5 72488531 to 72488652 121 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 336
AU023070 5 72496200 to 72497104 904 - lincRNA gene expressed sequence AU023070
Tssr51298 5 72501873 to 72501909 36 - TSS region transcription start site region 51298
Tssr51299 5 72503382 to 72503393 11 - TSS region transcription start site region 51299
Tssr51300 5 72503407 to 72503417 10 - TSS region transcription start site region 51300
Cpgi15944 5 72503416 to 72504499 1083 CpG island CpG island 15944
Tssr51301 5 72504061 to 72504066 5 - TSS region transcription start site region 51301
Tssr51302 5 72504177 to 72504188 11 - TSS region transcription start site region 51302
Tssr51303 5 72504189 to 72504200 11 - TSS region transcription start site region 51303
Tssr51304 5 72504202 to 72504247 45 - TSS region transcription start site region 51304
Tssr51305 5 72504249 to 72504276 27 - TSS region transcription start site region 51305
Tssr51306 5 72504277 to 72504289 12 - TSS region transcription start site region 51306
Tssr51307 5 72504303 to 72504310 7 - TSS region transcription start site region 51307
Tssr51308 5 72504335 to 72504346 11 - TSS region transcription start site region 51308
Tssr51309 5 72504500 to 72504520 20 - TSS region transcription start site region 51309
Tssr51310 5 72504529 to 72504551 22 - TSS region transcription start site region 51310
Tssr51311 5 72504568 to 72504581 13 - TSS region transcription start site region 51311
Nfxl1 5 72513301 to 72559684 46383 - protein coding gene nuclear transcription factor, X-box binding-like 1
Gm43815 5 72554240 to 72555229 989 - unclassified gene predicted gene 43815
Tssr51312 5 72556283 to 72556316 33 - TSS region transcription start site region 51312
Cpgi15945 5 72558938 to 72560000 1062 CpG island CpG island 15945
Tssr51313 5 72559614 to 72559691 77 - TSS region transcription start site region 51313
D5Mit152 5 72560395 to 72560492 97 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 152
Gm34144 5 72572174 to 72572432 258 + pseudogene predicted gene, 34144
Zar1 5 72577113 to 72581362 4249 - protein coding gene zygote arrest 1
Cpgi15946 5 72580243 to 72581289 1046 CpG island CpG island 15946
Gm5868 5 72581639 to 72587550 5911 - protein coding gene predicted gene 5868
Cpgi15947 5 72586830 to 72587603 773 CpG island CpG island 15947
Tssr51314 5 72587544 to 72587555 11 - TSS region transcription start site region 51314
Tssr46614 5 72602805 to 72602810 5 + TSS region transcription start site region 46614
Cnga1 5 72603696 to 72642752 39056 - protein coding gene cyclic nucleotide gated channel alpha 1