Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:71072656-71932659

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabra2 5 70959997 to 71095849 135852 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
D5Buc19 5 71072845 to 71073067 222 DNA segment DNA segment, Chr 5, Bucan 19
Cpgi15938 5 71095138 to 71096514 1376 CpG island CpG island 15938
Tssr51279 5 71095740 to 71095758 18 - TSS region transcription start site region 51279
Tssr51280 5 71095765 to 71095862 97 - TSS region transcription start site region 51280
Tssr51281 5 71095927 to 71095965 38 - TSS region transcription start site region 51281
Cox7b2 5 71442824 to 71548205 105381 - protein coding gene cytochrome c oxidase subunit 7B2
D5Buc47 5 71445714 to 71445916 202 DNA segment DNA segment, Chr 5, Bucan 47
Tssr51282 5 71502656 to 71502659 3 - TSS region transcription start site region 51282
Tssr51283 5 71548190 to 71548260 70 - TSS region transcription start site region 51283
Gabra4 5 71569749 to 71658308 88559 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
D5Buc33 5 71641126 to 71642304 1178 DNA segment DNA segment, Chr 5, Bucan 33
Cpgi15939 5 71657460 to 71658452 992 CpG island CpG island 15939
Tssr51284 5 71657886 to 71657899 13 - TSS region transcription start site region 51284
Tssr51285 5 71657913 to 71657953 40 - TSS region transcription start site region 51285
Tssr1506 5 71657919 to 71657921 2 + TSS region transcription start site region 1506
Tssr51286 5 71657958 to 71657989 31 - TSS region transcription start site region 51286
Tssr46601 5 71658040 to 71658058 18 + TSS region transcription start site region 46601
Tssr46602 5 71658061 to 71658088 27 + TSS region transcription start site region 46602
Tssr51287 5 71658091 to 71658115 24 - TSS region transcription start site region 51287
Gabrb1 5 71658113 to 72149037 490924 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
Gm38562 5 71680268 to 71699824 19556 - antisense lncRNA gene predicted gene, 38562
Tssr46603 5 71699894 to 71699903 9 + TSS region transcription start site region 46603
Tssr46604 5 71699918 to 71699949 31 + TSS region transcription start site region 46604
Tssr46605 5 71699956 to 71699973 17 + TSS region transcription start site region 46605
Tssr46606 5 71699977 to 71699997 20 + TSS region transcription start site region 46606
Cpgi15940 5 71700356 to 71701256 900 CpG island CpG island 15940
Tssr46607 5 71729192 to 71729195 3 + TSS region transcription start site region 46607
C230036F13Rik 5 71748247 to 71751717 3470 unclassified gene RIKEN cDNA C230036F13 gene
D5Buc46 5 71804342 to 71804599 257 DNA segment DNA segment, Chr 5, Bucan 46
D5Mit355 5 71895202 to 71895305 103 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 355