Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:68621083-69742113

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D5Mit270 5 68622075 to 68622195 120 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 270
Gm43842 5 68957408 to 68960389 2981 - unclassified gene predicted gene 43842
Gm35703 5 69024296 to 69040902 16606 - pseudogene predicted gene, 35703
Kctd8 5 69109285 to 69341679 232394 - protein coding gene potassium channel tetramerisation domain containing 8
D130004A15Rik 5 69168672 to 69170248 1576 - unclassified gene RIKEN cDNA D130004A15 gene
Gm43371 5 69181083 to 69182113 1030 - unclassified gene predicted gene 43371
Gm43373 5 69217421 to 69220290 2869 - unclassified gene predicted gene 43373
Gm43374 5 69221845 to 69224235 2390 - unclassified gene predicted gene 43374
Gm43230 5 69263585 to 69265713 2128 - unclassified gene predicted gene 43230
Gm43229 5 69275721 to 69277570 1849 - unclassified gene predicted gene 43229
Gm42888 5 69311707 to 69316067 4360 - unclassified gene predicted gene 42888
Cpgi15935 5 69340212 to 69341852 1640 CpG island CpG island 15935
Gm24368 5 69340783 to 69340888 105 + miRNA gene predicted gene, 24368
Tssr51261 5 69341537 to 69341547 10 - TSS region transcription start site region 51261
Tssr51262 5 69341552 to 69341568 16 - TSS region transcription start site region 51262
Tssr51263 5 69341573 to 69341582 9 - TSS region transcription start site region 51263
Tssr51264 5 69341671 to 69341685 14 - TSS region transcription start site region 51264
Tssr51265 5 69341699 to 69341714 15 - TSS region transcription start site region 51265
Gm23932 5 69386066 to 69386172 106 - snRNA gene predicted gene, 23932
Tssr46597 5 69461043 to 69461065 22 + TSS region transcription start site region 46597
Gm5867 5 69461152 to 69461743 591 + pseudogene predicted gene 5867
D5Mit185 5 69466366 to 69466511 145 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 185
Tssr51266 5 69483944 to 69483947 3 - TSS region transcription start site region 51266
Gm42887 5 69503842 to 69504960 1118 - unclassified gene predicted gene 42887
Yipf7 5 69516670 to 69542647 25977 - protein coding gene Yip1 domain family, member 7
Tssr51267 5 69542589 to 69542620 31 - TSS region transcription start site region 51267
Tssr51268 5 69542622 to 69542636 14 - TSS region transcription start site region 51268
3110031N09Rik 5 69556557 to 69556882 325 - unclassified gene RIKEN cDNA 3110031N09 gene
Cpgi15936 5 69556577 to 69557606 1029 CpG island CpG island 15936
Guf1 5 69556907 to 69575777 18870 + protein coding gene GUF1 homolog, GTPase
Tssr46598 5 69556936 to 69557018 82 + TSS region transcription start site region 46598
Gnpda2 5 69574998 to 69592332 17334 - protein coding gene glucosamine-6-phosphate deaminase 2
Tssr51269 5 69590766 to 69590774 8 - TSS region transcription start site region 51269
Tssr51270 5 69590783 to 69590803 20 - TSS region transcription start site region 51270
Cpgi15937 5 69591886 to 69592419 533 CpG island CpG island 15937
Tssr51271 5 69592245 to 69592256 11 - TSS region transcription start site region 51271
Tssr51272 5 69592278 to 69592308 30 - TSS region transcription start site region 51272
Tssr51273 5 69592311 to 69592318 7 - TSS region transcription start site region 51273