Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:67040262-67230399

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Limch1 5 66745840 to 67057159 311319 + protein coding gene LIM and calponin homology domains 1
Gm23841 5 67053679 to 67053792 113 - miRNA gene predicted gene, 23841
Tssr46562 5 67054462 to 67054469 7 + TSS region transcription start site region 46562
Tssr46563 5 67054765 to 67054775 10 + TSS region transcription start site region 46563
Phox2b 5 67094397 to 67099126 4729 - protein coding gene paired-like homeobox 2b
Tssr51221 5 67094871 to 67094879 8 - TSS region transcription start site region 51221
Cpgi15918 5 67095746 to 67096820 1074 CpG island CpG island 15918
Tssr51222 5 67095994 to 67095996 2 - TSS region transcription start site region 51222
Cpgi15919 5 67097511 to 67097981 470 CpG island CpG island 15919
Cpgi15920 5 67098583 to 67098888 305 CpG island CpG island 15920
Tssr46564 5 67098671 to 67098686 15 + TSS region transcription start site region 46564
Tssr51223 5 67099045 to 67099063 18 - TSS region transcription start site region 51223
Tssr51224 5 67099094 to 67099103 9 - TSS region transcription start site region 51224
Tssr51225 5 67099107 to 67099118 11 - TSS region transcription start site region 51225
Tssr51226 5 67099152 to 67099165 13 - TSS region transcription start site region 51226
Tssr51227 5 67099173 to 67099182 9 - TSS region transcription start site region 51227
Tssr51228 5 67099208 to 67099219 11 - TSS region transcription start site region 51228
Tssr51229 5 67099235 to 67099255 20 - TSS region transcription start site region 51229
Cpgi15921 5 67100589 to 67100815 226 CpG island CpG island 15921
Gm33167 5 67127503 to 67130145 2642 + lncRNA gene predicted gene, 33167
D5Mit234 5 67135262 to 67135399 137 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 234
Cpgi15922 5 67188305 to 67188567 262 CpG island CpG island 15922
Tssr46565 5 67205809 to 67205820 11 + TSS region transcription start site region 46565
Cpgi15923 5 67215454 to 67215700 246 CpG island CpG island 15923
Cpgi15924 5 67216154 to 67216927 773 CpG island CpG island 15924
Gm33293 5 67220873 to 67231889 11016 - lncRNA gene predicted gene, 33293
Cpgi15925 5 67222565 to 67223028 463 CpG island CpG island 15925
Cpgi15926 5 67227815 to 67227984 169 CpG island CpG island 15926
Cpgi15927 5 67228470 to 67228763 293 CpG island CpG island 15927