Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:66288703-66628784

40 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nsun7	5	66259897 to 66298026	38129	+	protein coding gene	NOL1/NOP2/Sun domain family, member 7
Apbb2	5	66298703 to 66618784	320081	-	protein coding gene	amyloid beta (A4) precursor protein-binding, family B, member 2
Tssr51199	5	66299331 to 66299342	11	-	TSS region	transcription start site region 51199
Tssr51200	5	66299367 to 66299382	15	-	TSS region	transcription start site region 51200
Tssr51201	5	66299400 to 66299419	19	-	TSS region	transcription start site region 51201
Tssr51202	5	66299924 to 66299932	8	-	TSS region	transcription start site region 51202
Gm43790	5	66321005 to 66323017	2012	-	unclassified gene	predicted gene 43790
Tssr51203	5	66323701 to 66323713	12	-	TSS region	transcription start site region 51203
Tssr51204	5	66323728 to 66323748	20	-	TSS region	transcription start site region 51204
Gm23183	5	66325740 to 66326062	322	-	unclassified non-coding RNA gene	predicted gene, 23183
Tssr51205	5	66333434 to 66333437	3	-	TSS region	transcription start site region 51205
Cpgi15909	5	66337312 to 66337824	512		CpG island	CpG island 15909
Tssr51206	5	66337625 to 66337646	21	-	TSS region	transcription start site region 51206
Tssr51207	5	66337647 to 66337677	30	-	TSS region	transcription start site region 51207
Gm43793	5	66345893 to 66347225	1332	-	unclassified gene	predicted gene 43793
Gm16273	5	66356918 to 66357185	267	+	pseudogene	predicted gene 16273
Tssr51208	5	66416859 to 66416865	6	-	TSS region	transcription start site region 51208
Gm43792	5	66429917 to 66432126	2209	-	unclassified gene	predicted gene 43792
Gm43794	5	66443732 to 66444423	691	-	unclassified gene	predicted gene 43794
Tssr51209	5	66451651 to 66451664	13	-	TSS region	transcription start site region 51209
Cpgi15910	5	66466188 to 66466706	518		CpG island	CpG island 15910
D5Dcr48	5	66485240 to 66485338	98		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 48
Tssr51210	5	66492091 to 66492103	12	-	TSS region	transcription start site region 51210
Tssr51211	5	66492118 to 66492148	30	-	TSS region	transcription start site region 51211
Tssr51212	5	66514815 to 66514837	22	-	TSS region	transcription start site region 51212
Gm43343	5	66524187 to 66526112	1925	-	unclassified gene	predicted gene 43343
Tssr51213	5	66524641 to 66524660	19	-	TSS region	transcription start site region 51213
D5Dcr45	5	66530286 to 66530381	95		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 45
Gm43795	5	66531796 to 66534161	2365	-	unclassified gene	predicted gene 43795
Tssr51214	5	66543910 to 66543931	21	-	TSS region	transcription start site region 51214
C530043K16Rik	5	66592462 to 66595570	3108	-	unclassified non-coding RNA gene	RIKEN cDNA C530043K16 gene
Tssr51215	5	66593437 to 66593458	21	-	TSS region	transcription start site region 51215
Tssr51216	5	66593518 to 66593532	14	-	TSS region	transcription start site region 51216
Cpgi15911	5	66594616 to 66594884	268		CpG island	CpG island 15911
Cpgi15912	5	66617830 to 66619060	1230		CpG island	CpG island 15912
Tssr51217	5	66618636 to 66618711	75	-	TSS region	transcription start site region 51217
Tssr51218	5	66618752 to 66618770	18	-	TSS region	transcription start site region 51218
Tssr51219	5	66618772 to 66618807	35	-	TSS region	transcription start site region 51219
Cpgi15913	5	66620121 to 66620703	582		CpG island	CpG island 15913
Uchl1os	5	66626495 to 66676497	50002	-	antisense lncRNA gene	ubiquitin carboxy-terminal hydrolase L1, opposite strand