Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:66161651-66741664

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26725 5 66151212 to 66174945 23733 + antisense lncRNA gene predicted gene, 26725
Gm22929 5 66164556 to 66164662 106 - snRNA gene predicted gene, 22929
1700126H18Rik 5 66166607 to 66191335 24728 - antisense lncRNA gene RIKEN cDNA 1700126H18 gene
Gm40311 5 66171692 to 66172207 515 - lncRNA gene predicted gene, 40311
Tssr51197 5 66173051 to 66173058 7 - TSS region transcription start site region 51197
Gm43772 5 66174965 to 66175343 378 - pseudogene predicted gene 43772
Tssr46526 5 66195577 to 66195585 8 + TSS region transcription start site region 46526
Tssr46527 5 66195599 to 66195608 9 + TSS region transcription start site region 46527
Gm15794 5 66197878 to 66198911 1033 - pseudogene predicted gene 15794
Tssr51198 5 66214544 to 66214545 1 - TSS region transcription start site region 51198
Gm3822 5 66214747 to 66217681 2934 + protein coding gene predicted gene 3822
Tssr46528 5 66215759 to 66215807 48 + TSS region transcription start site region 46528
D5Dcr67 5 66221079 to 66221174 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 67
Cpgi15907 5 66223035 to 66223417 382 CpG island CpG island 15907
D5Dcr68 5 66246456 to 66246551 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 68
Cpgi15908 5 66259812 to 66260399 587 CpG island CpG island 15908
Tssr46529 5 66259863 to 66259887 24 + TSS region transcription start site region 46529
Tssr46530 5 66259890 to 66259904 14 + TSS region transcription start site region 46530
Nsun7 5 66259897 to 66298026 38129 + protein coding gene NOL1/NOP2/Sun domain family, member 7
Tssr46531 5 66260116 to 66260120 4 + TSS region transcription start site region 46531
Tssr46532 5 66260121 to 66260170 49 + TSS region transcription start site region 46532
Apbb2 5 66298703 to 66618784 320081 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 2
Tssr51199 5 66299331 to 66299342 11 - TSS region transcription start site region 51199
Tssr51200 5 66299367 to 66299382 15 - TSS region transcription start site region 51200
Tssr51201 5 66299400 to 66299419 19 - TSS region transcription start site region 51201
Tssr51202 5 66299924 to 66299932 8 - TSS region transcription start site region 51202
Gm43790 5 66321005 to 66323017 2012 - unclassified gene predicted gene 43790
Tssr51203 5 66323701 to 66323713 12 - TSS region transcription start site region 51203
Tssr51204 5 66323728 to 66323748 20 - TSS region transcription start site region 51204
Gm23183 5 66325740 to 66326062 322 - unclassified non-coding RNA gene predicted gene, 23183
Tssr51205 5 66333434 to 66333437 3 - TSS region transcription start site region 51205
Cpgi15909 5 66337312 to 66337824 512 CpG island CpG island 15909
Tssr51206 5 66337625 to 66337646 21 - TSS region transcription start site region 51206
Tssr51207 5 66337647 to 66337677 30 - TSS region transcription start site region 51207
Gm43793 5 66345893 to 66347225 1332 - unclassified gene predicted gene 43793
Gm16273 5 66356918 to 66357185 267 + pseudogene predicted gene 16273
Tssr51208 5 66416859 to 66416865 6 - TSS region transcription start site region 51208
Gm43792 5 66429917 to 66432126 2209 - unclassified gene predicted gene 43792
Gm43794 5 66443732 to 66444423 691 - unclassified gene predicted gene 43794
Tssr51209 5 66451651 to 66451664 13 - TSS region transcription start site region 51209
Cpgi15910 5 66466188 to 66466706 518 CpG island CpG island 15910
D5Dcr48 5 66485240 to 66485338 98 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 48
Tssr51210 5 66492091 to 66492103 12 - TSS region transcription start site region 51210
Tssr51211 5 66492118 to 66492148 30 - TSS region transcription start site region 51211
Tssr51212 5 66514815 to 66514837 22 - TSS region transcription start site region 51212
Gm43343 5 66524187 to 66526112 1925 - unclassified gene predicted gene 43343
Tssr51213 5 66524641 to 66524660 19 - TSS region transcription start site region 51213
D5Dcr45 5 66530286 to 66530381 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 45
Gm43795 5 66531796 to 66534161 2365 - unclassified gene predicted gene 43795
Tssr51214 5 66543910 to 66543931 21 - TSS region transcription start site region 51214
C530043K16Rik 5 66592462 to 66595570 3108 - unclassified non-coding RNA gene RIKEN cDNA C530043K16 gene
Tssr51215 5 66593437 to 66593458 21 - TSS region transcription start site region 51215
Tssr51216 5 66593518 to 66593532 14 - TSS region transcription start site region 51216
Cpgi15911 5 66594616 to 66594884 268 CpG island CpG island 15911
Cpgi15912 5 66617830 to 66619060 1230 CpG island CpG island 15912
Tssr51217 5 66618636 to 66618711 75 - TSS region transcription start site region 51217
Tssr51218 5 66618752 to 66618770 18 - TSS region transcription start site region 51218
Tssr51219 5 66618772 to 66618807 35 - TSS region transcription start site region 51219
Cpgi15913 5 66620121 to 66620703 582 CpG island CpG island 15913
Uchl1os 5 66626495 to 66676497 50002 - antisense lncRNA gene ubiquitin carboxy-terminal hydrolase L1, opposite strand
Uchl1 5 66676121 to 66687234 11113 + protein coding gene ubiquitin carboxy-terminal hydrolase L1
Tssr46533 5 66676200 to 66676221 21 + TSS region transcription start site region 46533
Cpgi15914 5 66676201 to 66677126 925 CpG island CpG island 15914
Tssr46534 5 66676231 to 66676257 26 + TSS region transcription start site region 46534
Tssr46535 5 66677003 to 66677031 28 + TSS region transcription start site region 46535
Tssr46536 5 66686198 to 66686203 5 + TSS region transcription start site region 46536
Tssr46537 5 66686884 to 66686893 9 + TSS region transcription start site region 46537
Tssr46538 5 66686934 to 66686956 22 + TSS region transcription start site region 46538
Gm43279 5 66688882 to 66691393 2511 + unclassified gene predicted gene 43279
Tssr51220 5 66689917 to 66689966 49 - TSS region transcription start site region 51220
4933424C09Rik 5 66718369 to 66719918 1549 unclassified gene RIKEN cDNA 4933424C09 gene
Gm43280 5 66718370 to 66719919 1549 + unclassified gene predicted gene 43280
Tssr1499 5 66719916 to 66719923 7 - TSS region transcription start site region 1499
D5Ncnp1 5 66731742 to 66731916 174 DNA segment DNA segment, Chr 5, National Center of Neurology and Psychiatry 1