Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:66149544-66279545

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbm47 5 66016549 to 66151954 135405 - protein coding gene RNA binding motif protein 47
Cpgi15906 5 66150669 to 66151686 1017 CpG island CpG island 15906
Tssr51184 5 66150672 to 66150707 35 - TSS region transcription start site region 51184
Tssr46525 5 66150785 to 66150810 25 + TSS region transcription start site region 46525
Tssr51185 5 66150906 to 66150960 54 - TSS region transcription start site region 51185
Tssr51186 5 66151188 to 66151197 9 - TSS region transcription start site region 51186
Gm26725 5 66151212 to 66174945 23733 + antisense lncRNA gene predicted gene, 26725
Tssr51187 5 66151305 to 66151308 3 - TSS region transcription start site region 51187
Tssr51188 5 66151332 to 66151343 11 - TSS region transcription start site region 51188
Tssr51189 5 66151362 to 66151375 13 - TSS region transcription start site region 51189
Tssr51190 5 66151391 to 66151400 9 - TSS region transcription start site region 51190
Tssr51191 5 66151530 to 66151541 11 - TSS region transcription start site region 51191
Tssr51192 5 66151648 to 66151681 33 - TSS region transcription start site region 51192
Tssr51193 5 66151684 to 66151695 11 - TSS region transcription start site region 51193
Tssr51194 5 66151719 to 66151728 9 - TSS region transcription start site region 51194
Tssr51195 5 66151857 to 66151866 9 - TSS region transcription start site region 51195
Tssr51196 5 66151903 to 66151962 59 - TSS region transcription start site region 51196
Gm22929 5 66164556 to 66164662 106 - snRNA gene predicted gene, 22929
1700126H18Rik 5 66166607 to 66191335 24728 - antisense lncRNA gene RIKEN cDNA 1700126H18 gene
Gm40311 5 66171692 to 66172207 515 - lncRNA gene predicted gene, 40311
Tssr51197 5 66173051 to 66173058 7 - TSS region transcription start site region 51197
Gm43772 5 66174965 to 66175343 378 - pseudogene predicted gene 43772
Tssr46526 5 66195577 to 66195585 8 + TSS region transcription start site region 46526
Tssr46527 5 66195599 to 66195608 9 + TSS region transcription start site region 46527
Gm15794 5 66197878 to 66198911 1033 - pseudogene predicted gene 15794
Tssr51198 5 66214544 to 66214545 1 - TSS region transcription start site region 51198
Gm3822 5 66214747 to 66217681 2934 + protein coding gene predicted gene 3822
Tssr46528 5 66215759 to 66215807 48 + TSS region transcription start site region 46528
D5Dcr67 5 66221079 to 66221174 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 67
Cpgi15907 5 66223035 to 66223417 382 CpG island CpG island 15907
D5Dcr68 5 66246456 to 66246551 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 68
Cpgi15908 5 66259812 to 66260399 587 CpG island CpG island 15908
Tssr46529 5 66259863 to 66259887 24 + TSS region transcription start site region 46529
Tssr46530 5 66259890 to 66259904 14 + TSS region transcription start site region 46530
Nsun7 5 66259897 to 66298026 38129 + protein coding gene NOL1/NOP2/Sun domain family, member 7
Tssr46531 5 66260116 to 66260120 4 + TSS region transcription start site region 46531
Tssr46532 5 66260121 to 66260170 49 + TSS region transcription start site region 46532