Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:65380651-65443027

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klb 5 65348411 to 65384020 35609 + protein coding gene klotho beta
Tssr46459 5 65386455 to 65386457 2 + TSS region transcription start site region 46459
Rpl9 5 65388364 to 65391431 3067 - protein coding gene ribosomal protein L9
Cpgi15897 5 65390535 to 65391745 1210 CpG island CpG island 15897
Tssr51095 5 65391385 to 65391405 20 - TSS region transcription start site region 51095
Tssr51096 5 65391408 to 65391451 43 - TSS region transcription start site region 51096
Lias 5 65391497 to 65410423 18926 + protein coding gene lipoic acid synthetase
Tssr46460 5 65391523 to 65391565 42 + TSS region transcription start site region 46460
Tssr46461 5 65391577 to 65391588 11 + TSS region transcription start site region 46461
Tssr46462 5 65391593 to 65391594 1 + TSS region transcription start site region 46462
Tssr46463 5 65392642 to 65392647 5 + TSS region transcription start site region 46463
1110003F10Rik 5 65405751 to 65406517 766 + unclassified gene RIKEN cDNA 1110003F10 gene
Gm43311 5 65410651 to 65413027 2376 - unclassified gene predicted gene 43311
Ugdh 5 65413207 to 65435842 22635 - protein coding gene UDP-glucose dehydrogenase
Tssr51097 5 65419133 to 65419162 29 - TSS region transcription start site region 51097
Tssr51098 5 65421581 to 65421590 9 - TSS region transcription start site region 51098
Tssr51099 5 65422884 to 65422895 11 - TSS region transcription start site region 51099
Tssr51100 5 65422907 to 65422918 11 - TSS region transcription start site region 51100
D5Mit15 5 65422974 to 65423122 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 15
Tssr46464 5 65423587 to 65423621 34 + TSS region transcription start site region 46464
Tssr51101 5 65424328 to 65424339 11 - TSS region transcription start site region 51101
Gm43552 5 65427427 to 65492833 65406 - protein coding gene predicted gene 43552
Tssr51102 5 65427523 to 65427552 29 - TSS region transcription start site region 51102
Tssr51103 5 65428354 to 65428365 11 - TSS region transcription start site region 51103
Tssr51104 5 65428398 to 65428405 7 - TSS region transcription start site region 51104
Gm43289 5 65430106 to 65431580 1474 - unclassified gene predicted gene 43289
Tssr51105 5 65434885 to 65434889 4 - TSS region transcription start site region 51105
Cpgi15898 5 65435231 to 65436410 1179 CpG island CpG island 15898
Tssr51106 5 65435655 to 65435695 40 - TSS region transcription start site region 51106
Tssr51107 5 65435717 to 65435734 17 - TSS region transcription start site region 51107
Tssr51108 5 65435759 to 65435766 7 - TSS region transcription start site region 51108
Tssr51109 5 65435806 to 65435829 23 - TSS region transcription start site region 51109
Tssr51110 5 65435881 to 65435929 48 - TSS region transcription start site region 51110
Tssr51111 5 65436424 to 65436462 38 - TSS region transcription start site region 51111