Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:64720321-64890328

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20033 5 64708210 to 64741937 33727 - lncRNA gene predicted gene, 20033
Tssr46406 5 64781003 to 64781032 29 + TSS region transcription start site region 46406
Tssr46407 5 64797945 to 64797948 3 + TSS region transcription start site region 46407
Gm38457 5 64802365 to 64804975 2610 - protein coding gene predicted gene, 38457
Cpgi15888 5 64802536 to 64804507 1971 CpG island CpG island 15888
Tssr46408 5 64803363 to 64803374 11 + TSS region transcription start site region 46408
Tssr46409 5 64803470 to 64803477 7 + TSS region transcription start site region 46409
Tssr46410 5 64803481 to 64803499 18 + TSS region transcription start site region 46410
Tssr46411 5 64803513 to 64803530 17 + TSS region transcription start site region 46411
Klf3 5 64803523 to 64832903 29380 + protein coding gene Kruppel-like factor 3 (basic)
Tssr46412 5 64803550 to 64803561 11 + TSS region transcription start site region 46412
Tssr46413 5 64803571 to 64803580 9 + TSS region transcription start site region 46413
Tssr46414 5 64803588 to 64803607 19 + TSS region transcription start site region 46414
Tssr46415 5 64803614 to 64803627 13 + TSS region transcription start site region 46415
C230096K16Rik 5 64804014 to 64805735 1721 + protein coding gene RIKEN cDNA C230096K16 gene
Tssr51067 5 64804118 to 64804149 31 - TSS region transcription start site region 51067
Tssr51068 5 64805321 to 64805328 7 - TSS region transcription start site region 51068
Tssr51069 5 64806263 to 64806278 15 - TSS region transcription start site region 51069
Tssr46416 5 64806361 to 64806364 3 + TSS region transcription start site region 46416
Tssr46417 5 64810218 to 64810262 44 + TSS region transcription start site region 46417
Tssr46418 5 64812336 to 64812350 14 + TSS region transcription start site region 46418
Tssr46419 5 64812360 to 64812378 18 + TSS region transcription start site region 46419
Tssr51070 5 64812783 to 64812796 13 - TSS region transcription start site region 51070
Gm31684 5 64816838 to 64819750 2912 + lncRNA gene predicted gene, 31684
Tssr46420 5 64820955 to 64820959 4 + TSS region transcription start site region 46420
Tssr46421 5 64821915 to 64821930 15 + TSS region transcription start site region 46421
Tssr46422 5 64822078 to 64822108 30 + TSS region transcription start site region 46422
Tssr46423 5 64822117 to 64822173 56 + TSS region transcription start site region 46423
Tssr46424 5 64822220 to 64822246 26 + TSS region transcription start site region 46424
Tssr46425 5 64822984 to 64823010 26 + TSS region transcription start site region 46425
Cpgi15889 5 64826596 to 64826757 161 CpG island CpG island 15889
Tssr46426 5 64829879 to 64829900 21 + TSS region transcription start site region 46426
Tssr46427 5 64830018 to 64830045 27 + TSS region transcription start site region 46427
Tssr46428 5 64830464 to 64830468 4 + TSS region transcription start site region 46428
Tssr1489 5 64864766 to 64864788 22 - TSS region transcription start site region 1489
Tssr51071 5 64865454 to 64865504 50 - TSS region transcription start site region 51071
Tssr51072 5 64865545 to 64865560 15 - TSS region transcription start site region 51072
Gm31889 5 64879545 to 64888266 8721 + lncRNA gene predicted gene, 31889