Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:63992950-64228351

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm25608	5	64002353 to 64002484	131	-	snoRNA gene	predicted gene, 25608
5830416I19Rik	5	64044978 to 64050228	5250	+	lincRNA gene	RIKEN cDNA 5830416I19 gene
Cpgi15884	5	64092711 to 64093502	791		CpG island	CpG island 15884
Tssr46372	5	64092925 to 64092984	59	+	TSS region	transcription start site region 46372
Pgm2	5	64092950 to 64128351	35401	+	protein coding gene	phosphoglucomutase 2
Tssr46373	5	64092989 to 64093007	18	+	TSS region	transcription start site region 46373
Tssr51057	5	64093537 to 64093547	10	-	TSS region	transcription start site region 51057
D5Mit303	5	64096828 to 64096943	115		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 303
D5Mit303.1	5	64096905 to 64097027	122		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 303.1
Gm23967	5	64101430 to 64101507	77	-	miRNA gene	predicted gene, 23967
Tssr46374	5	64102887 to 64102903	16	+	TSS region	transcription start site region 46374
Tssr46375	5	64103709 to 64103754	45	+	TSS region	transcription start site region 46375
Gm22395	5	64107407 to 64107502	95	-	miRNA gene	predicted gene, 22395
Gm22559	5	64144248 to 64144381	133	+	snoRNA gene	predicted gene, 22559
Tbc1d1	5	64156310 to 64351486	195176	+	protein coding gene	TBC1 domain family, member 1
Tssr46376	5	64156515 to 64156533	18	+	TSS region	transcription start site region 46376
Tssr46377	5	64156535 to 64156553	18	+	TSS region	transcription start site region 46377
Cpgi15885	5	64159194 to 64160988	1794		CpG island	CpG island 15885
Tssr46378	5	64159429 to 64159443	14	+	TSS region	transcription start site region 46378
Tssr46379	5	64160049 to 64160060	11	+	TSS region	transcription start site region 46379
Tssr46380	5	64160207 to 64160220	13	+	TSS region	transcription start site region 46380
Tssr46381	5	64160227 to 64160270	43	+	TSS region	transcription start site region 46381
Tssr46382	5	64160271 to 64160296	25	+	TSS region	transcription start site region 46382
Cpgi15886	5	64173461 to 64173711	250		CpG island	CpG island 15886
Gm15824	5	64190033 to 64190987	954	-	pseudogene	predicted gene 15824
Tssr46383	5	64220909 to 64220916	7	+	TSS region	transcription start site region 46383