Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:63981828-64211943

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43840 5 63990388 to 63990871 483 - pseudogene predicted gene 43840
Gm25608 5 64002353 to 64002484 131 - snoRNA gene predicted gene, 25608
5830416I19Rik 5 64044978 to 64050228 5250 + lincRNA gene RIKEN cDNA 5830416I19 gene
Cpgi15884 5 64092711 to 64093502 791 CpG island CpG island 15884
Tssr46372 5 64092925 to 64092984 59 + TSS region transcription start site region 46372
Pgm2 5 64092950 to 64128351 35401 + protein coding gene phosphoglucomutase 2
Tssr46373 5 64092989 to 64093007 18 + TSS region transcription start site region 46373
Tssr51057 5 64093537 to 64093547 10 - TSS region transcription start site region 51057
D5Mit303 5 64096828 to 64096943 115 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 303
D5Mit303.1 5 64096905 to 64097027 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 303.1
Gm23967 5 64101430 to 64101507 77 - miRNA gene predicted gene, 23967
Tssr46374 5 64102887 to 64102903 16 + TSS region transcription start site region 46374
Tssr46375 5 64103709 to 64103754 45 + TSS region transcription start site region 46375
Gm22395 5 64107407 to 64107502 95 - miRNA gene predicted gene, 22395
Gm22559 5 64144248 to 64144381 133 + snoRNA gene predicted gene, 22559
Tbc1d1 5 64156310 to 64351486 195176 + protein coding gene TBC1 domain family, member 1
Tssr46376 5 64156515 to 64156533 18 + TSS region transcription start site region 46376
Tssr46377 5 64156535 to 64156553 18 + TSS region transcription start site region 46377
Cpgi15885 5 64159194 to 64160988 1794 CpG island CpG island 15885
Tssr46378 5 64159429 to 64159443 14 + TSS region transcription start site region 46378
Tssr46379 5 64160049 to 64160060 11 + TSS region transcription start site region 46379
Tssr46380 5 64160207 to 64160220 13 + TSS region transcription start site region 46380
Tssr46381 5 64160227 to 64160270 43 + TSS region transcription start site region 46381
Tssr46382 5 64160271 to 64160296 25 + TSS region transcription start site region 46382
Cpgi15886 5 64173461 to 64173711 250 CpG island CpG island 15886
Gm15824 5 64190033 to 64190987 954 - pseudogene predicted gene 15824