Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:63717363-63994625

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nwd2 5 63649103 to 63810546 161443 + protein coding gene NACHT and WD repeat domain containing 2
Tssr46365 5 63784845 to 63784847 2 + TSS region transcription start site region 46365
Cpgi15881 5 63812076 to 63813121 1045 CpG island CpG island 15881
0610040J01Rik 5 63812363 to 63899625 87262 + protein coding gene RIKEN cDNA 0610040J01 gene
Tssr46366 5 63812447 to 63812538 91 + TSS region transcription start site region 46366
Tssr46367 5 63815727 to 63815733 6 + TSS region transcription start site region 46367
Tssr51051 5 63827816 to 63827824 8 - TSS region transcription start site region 51051
Tssr46368 5 63840234 to 63840245 11 + TSS region transcription start site region 46368
Tssr46369 5 63840273 to 63840281 8 + TSS region transcription start site region 46369
Rell1 5 63908897 to 63968897 60000 - protein coding gene RELT-like 1
Gm15819 5 63923901 to 63924970 1069 + antisense lncRNA gene predicted gene 15819
Tssr51052 5 63939551 to 63939587 36 - TSS region transcription start site region 51052
Tssr46370 5 63945617 to 63945618 1 + TSS region transcription start site region 46370
Cpgi15882 5 63953460 to 63953717 257 CpG island CpG island 15882
Tssr51053 5 63953639 to 63953648 9 - TSS region transcription start site region 51053
Tssr46371 5 63967920 to 63967921 1 + TSS region transcription start site region 46371
Cpgi15883 5 63968291 to 63969259 968 CpG island CpG island 15883
Tssr51054 5 63968807 to 63968840 33 - TSS region transcription start site region 51054
Tssr51055 5 63968851 to 63968864 13 - TSS region transcription start site region 51055
Tssr51056 5 63968867 to 63968901 34 - TSS region transcription start site region 51056
Gm43840 5 63990388 to 63990871 483 - pseudogene predicted gene 43840