Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:60707353-63557484

Filter by:
46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23708 5 60717317 to 60717439 122 - snoRNA gene predicted gene, 23708
Tssr46352 5 60744683 to 60744691 8 + TSS region transcription start site region 46352
Gm42860 5 60803716 to 60807706 3990 - unclassified gene predicted gene 42860
Gm8182 5 60821659 to 60822427 768 - pseudogene predicted gene 8182
1700014F14Rik 5 60940938 to 60945649 4711 - lincRNA gene RIKEN cDNA 1700014F14 gene
Gm40307 5 60980728 to 60994788 14060 - lncRNA gene predicted gene, 40307
Cpgi15877 5 61068786 to 61069062 276 CpG island CpG island 15877
Gm43382 5 61337896 to 61338733 837 - pseudogene predicted gene 43382
D5Mit302 5 61428500 to 61428622 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 302
Pcfm4 5 61428500 to 61428622 122 QTL periosteal circumference and femur length 4
Gm43383 5 61602570 to 61603038 468 - pseudogene predicted gene 43383
Gm43384 5 61717030 to 61717666 636 - pseudogene predicted gene 43384
Gm40308 5 61764260 to 61774181 9921 - lncRNA gene predicted gene, 40308
Tssr46353 5 61788030 to 61788033 3 + TSS region transcription start site region 46353
Tssr46354 5 61806700 to 61806715 15 + TSS region transcription start site region 46354
Tssr46355 5 61806722 to 61806736 14 + TSS region transcription start site region 46355
Tssr46356 5 61806739 to 61806750 11 + TSS region transcription start site region 46356
G6pd2 5 61808843 to 61810477 1634 + protein coding gene glucose-6-phosphate dehydrogenase 2
Tssr46357 5 61968538 to 61968542 4 + TSS region transcription start site region 46357
Gm42430 5 62004220 to 62004835 615 + pseudogene predicted gene 42430
Gm18344 5 62009285 to 62010007 722 + pseudogene predicted gene, 18344
Gm22273 5 62132353 to 62132484 131 - snoRNA gene predicted gene, 22273
Gm43238 5 62428719 to 62429077 358 + unclassified gene predicted gene 43238
Gm24079 5 62523408 to 62523539 131 - snoRNA gene predicted gene, 24079
Arap2 5 62602445 to 62766159 163714 - protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Gm43237 5 62612415 to 62613458 1043 - unclassified gene predicted gene 43237
Gm43753 5 62656799 to 62660107 3308 - unclassified gene predicted gene 43753
Tssr51045 5 62677445 to 62677468 23 - TSS region transcription start site region 51045
Cpgi15878 5 62765576 to 62766674 1098 CpG island CpG island 15878
Tssr51046 5 62765577 to 62765587 10 - TSS region transcription start site region 51046
Tssr51047 5 62765618 to 62765632 14 - TSS region transcription start site region 51047
Tssr51048 5 62766153 to 62766246 93 - TSS region transcription start site region 51048
Tssr46358 5 62766325 to 62766341 16 + TSS region transcription start site region 46358
Tssr51049 5 62766399 to 62766412 13 - TSS region transcription start site region 51049
Tssr46359 5 62811650 to 62811688 38 + TSS region transcription start site region 46359
Dthd1 5 62813823 to 62888308 74485 + protein coding gene death domain containing 1
Tssr46360 5 62818593 to 62818597 4 + TSS region transcription start site region 46360
Tssr46361 5 62858747 to 62858758 11 + TSS region transcription start site region 46361
Tssr46362 5 62880031 to 62880034 3 + TSS region transcription start site region 46362
Cpgi15879 5 62888031 to 62888198 167 CpG island CpG island 15879
D5Mit256 5 62962917 to 62963068 151 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 256
Tssr1485 5 63164574 to 63164577 3 + TSS region transcription start site region 1485
Mwmlpa4 5 63165263 to 63165263 0 QTL Morris water maze latency to platform, all, 4
Mwmlpt4 5 63165263 to 63165263 0 QTL Morris water maze latency to platform, training, 4
D5Mit200 5 63548099 to 63548203 104 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 200
Tir5 5 104239199 to 63548099 -40691100 QTL trypanosome infection response 5