Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:59648630-61509050

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr46350 5 59685078 to 59685080 2 + TSS region transcription start site region 46350
Tssr46351 5 59771195 to 59771196 1 + TSS region transcription start site region 46351
Gm43043 5 59777912 to 59778323 411 + pseudogene predicted gene 43043
Tssr51040 5 59886221 to 59886224 3 - TSS region transcription start site region 51040
Tssr51041 5 59948274 to 59948277 3 - TSS region transcription start site region 51041
Gm43041 5 59953511 to 59956140 2629 - unclassified gene predicted gene 43041
4933402J10Rik 5 59963119 to 59986002 22883 - lincRNA gene RIKEN cDNA 4933402J10 gene
Tssr51042 5 59985982 to 59985997 15 - TSS region transcription start site region 51042
Tssr51043 5 59986001 to 59986002 1 - TSS region transcription start site region 51043
Tssr51044 5 59986004 to 59986037 33 - TSS region transcription start site region 51044
Gm42862 5 59996941 to 59999561 2620 - unclassified gene predicted gene 42862
Gm43392 5 60024896 to 60025329 433 - pseudogene predicted gene 43392
Gm43393 5 60025690 to 60025883 193 - pseudogene predicted gene 43393
Gm42861 5 60175916 to 60176549 633 - pseudogene predicted gene 42861
Cpgi15876 5 60231361 to 60231523 162 CpG island CpG island 15876
Cbfa2t2-ps1 5 60231483 to 60232212 729 + pseudogene CBFA2/RUNX1 translocation partner 2, pseudogene 1
Gm23331 5 60500833 to 60500940 107 - snRNA gene predicted gene, 23331
Gm43390 5 60578630 to 60579050 420 + pseudogene predicted gene 43390
Gm3372 5 60674317 to 60676108 1791 + pseudogene predicted gene 3372
Gm23708 5 60717317 to 60717439 122 - snoRNA gene predicted gene, 23708
Tssr46352 5 60744683 to 60744691 8 + TSS region transcription start site region 46352
Gm42860 5 60803716 to 60807706 3990 - unclassified gene predicted gene 42860
Gm8182 5 60821659 to 60822427 768 - pseudogene predicted gene 8182
1700014F14Rik 5 60940938 to 60945649 4711 - lincRNA gene RIKEN cDNA 1700014F14 gene
Gm40307 5 60980728 to 60994788 14060 - lncRNA gene predicted gene, 40307
Cpgi15877 5 61068786 to 61069062 276 CpG island CpG island 15877
Gm43382 5 61337896 to 61338733 837 - pseudogene predicted gene 43382
Pcfm4 5 61428500 to 61428622 122 QTL periosteal circumference and femur length 4
D5Mit302 5 61428500 to 61428622 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 302