Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:5931520-7361808

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23838 5 6014863 to 6015024 161 - snRNA gene predicted gene, 23838
Tssr1418 5 6104286 to 6104287 1 - TSS region transcription start site region 1418
Gm42718 5 6311311 to 6313991 2680 - pseudogene predicted gene 42718
Gm42719 5 6358836 to 6359190 354 + pseudogene predicted gene 42719
D5Mit385 5 6409897 to 6409998 101 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 385
Gm24686 5 6410438 to 6410530 92 + snRNA gene predicted gene, 24686
Gm40263 5 6414399 to 6427065 12666 + lincRNA gene predicted gene, 40263
Gm3203 5 6426844 to 6429232 2388 - pseudogene predicted gene 3203
Bwq13 5 6556176 to 6556323 147 QTL body weight QTL 13
D5Mit123 5 6556176 to 6556323 147 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 123
Gm43324 5 6646520 to 6646808 288 - pseudogene predicted gene 43324
Gm5714 5 6748894 to 6749448 554 - pseudogene predicted gene 5714
Zfp804b 5 6769030 to 7344378 575348 - protein coding gene zinc finger protein 804B
Tssr1419 5 6818536 to 6818540 4 + TSS region transcription start site region 1419
Tssr45095 5 6951726 to 6951734 8 + TSS region transcription start site region 45095
Gm24525 5 7177706 to 7177856 150 - snRNA gene predicted gene, 24525
Cpgi15526 5 7179231 to 7179594 363 CpG island CpG island 15526
Tssr45096 5 7179299 to 7179302 3 + TSS region transcription start site region 45096
Tubb4b-ps1 5 7179365 to 7180700 1335 + pseudogene tubulin, beta 4B class IVB, pseudogene 1
Tssr1420 5 7180030 to 7180050 20 + TSS region transcription start site region 1420
Tssr50074 5 7186422 to 7186428 6 - TSS region transcription start site region 50074
Gm42598 5 7233401 to 7235837 2436 - unclassified gene predicted gene 42598
Gm42597 5 7260856 to 7262399 1543 - unclassified gene predicted gene 42597
Gm43841 5 7276324 to 7276909 585 + pseudogene predicted gene 43841
Tssr45097 5 7304113 to 7304124 11 + TSS region transcription start site region 45097
Tex47 5 7304119 to 7311491 7372 + protein coding gene testis expressed 47
Tssr45098 5 7304128 to 7304152 24 + TSS region transcription start site region 45098
D5Mit145 5 7333014 to 7333165 151 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 145
Cpgi15527 5 7344227 to 7345111 884 CpG island CpG island 15527