MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:57991439-58254924

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pcdh7	5	57717967 to 58133230	415263	+	protein coding gene	protocadherin 7
Tssr46335	5	58002724 to 58002736	12	+	TSS region	transcription start site region 46335
Tssr46336	5	58004881 to 58004895	14	+	TSS region	transcription start site region 46336
Tssr46337	5	58014606 to 58014626	20	+	TSS region	transcription start site region 46337
D5Mit1003	5	58030054 to 58030191	137		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 1003
Tssr46338	5	58030147 to 58030153	6	+	TSS region	transcription start site region 46338
Tssr46339	5	58035387 to 58035391	4	+	TSS region	transcription start site region 46339
Tssr46340	5	58042781 to 58042811	30	+	TSS region	transcription start site region 46340
Tssr46341	5	58044365 to 58044383	18	+	TSS region	transcription start site region 46341
Gm42483	5	58047331 to 58049072	1741	+	unclassified gene	predicted gene 42483
Tssr46342	5	58059478 to 58059504	26	+	TSS region	transcription start site region 46342
Tssr46343	5	58109467 to 58109476	9	+	TSS region	transcription start site region 46343
Gm42486	5	58121439 to 58124924	3485	+	unclassified gene	predicted gene 42486
Tssr46344	5	58129401 to 58129405	4	+	TSS region	transcription start site region 46344
Tssr46345	5	58132546 to 58132550	4	+	TSS region	transcription start site region 46345
Gm42976	5	58149623 to 58149844	221	-	pseudogene	predicted gene 42976
Gm43045	5	58173434 to 58175528	2094	-	unclassified gene	predicted gene 43045
Tssr46346	5	58226617 to 58226628	11	+	TSS region	transcription start site region 46346