MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:5657220-5727365

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfap69	5	5579278 to 5664239	84961	-	protein coding gene	cilia and flagella associated protein 69
Tssr50059	5	5663207 to 5663221	14	-	TSS region	transcription start site region 50059
Tssr50060	5	5663263 to 5663294	31	-	TSS region	transcription start site region 50060
Cpgi15523	5	5663755 to 5664386	631		CpG island	CpG island 15523
Tssr50061	5	5664176 to 5664181	5	-	TSS region	transcription start site region 50061
Tssr50062	5	5664183 to 5664192	9	-	TSS region	transcription start site region 50062
Tssr50063	5	5664196 to 5664253	57	-	TSS region	transcription start site region 50063
Gm40262	5	5664289 to 5716533	52244	+	lncRNA gene	predicted gene, 40262
Steap2	5	5664829 to 5694568	29739	-	protein coding gene	six transmembrane epithelial antigen of prostate 2
D5Mit417	5	5692220 to 5692365	145		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 417
Cpgi15524	5	5693614 to 5694706	1092		CpG island	CpG island 15524
Tssr50064	5	5694024 to 5694109	85	-	TSS region	transcription start site region 50064
Tssr50065	5	5694269 to 5694312	43	-	TSS region	transcription start site region 50065
Tssr50066	5	5694436 to 5694447	11	-	TSS region	transcription start site region 50066
Tssr50067	5	5694480 to 5694491	11	-	TSS region	transcription start site region 50067
Tssr50068	5	5694499 to 5694539	40	-	TSS region	transcription start site region 50068
Tssr50069	5	5694559 to 5694581	22	-	TSS region	transcription start site region 50069
Gm43219	5	5696858 to 5698794	1936	+	unclassified gene	predicted gene 43219