MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:55635109-57555943

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43778	5	55652949 to 55653147	198	+	unclassified gene	predicted gene 43778
Gm20223	5	55722617 to 55723421	804	-	pseudogene	predicted gene, 20223
Tlcpl2	5	55758174 to 55758174	0		QTL	tail clip latency 2
Gm43705	5	55789171 to 55792887	3716	-	unclassified gene	predicted gene 43705
Gm30778	5	55803225 to 55821093	17868	-	lncRNA gene	predicted gene, 30778
D5Mit184	5	56011681 to 56011806	125		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 184
Tssr46280	5	56050423 to 56050426	3	+	TSS region	transcription start site region 46280
Tssr46281	5	56157305 to 56157306	1	+	TSS region	transcription start site region 46281
Gm43315	5	56157338 to 56157650	312	+	pseudogene	predicted gene 43315
Gm42977	5	56414210 to 56490232	76022	+	pseudogene	predicted gene 42977
A930008L05Rik	5	56595109 to 56595943	834		unclassified gene	RIKEN cDNA A930008L05 gene
Gm23896	5	56736090 to 56736219	129	+	snoRNA gene	predicted gene, 23896
Tssr46282	5	56896481 to 56896484	3	+	TSS region	transcription start site region 46282
Gm24902	5	57110824 to 57110946	122	+	snoRNA gene	predicted gene, 24902
Gm23015	5	57128645 to 57128772	127	-	snoRNA gene	predicted gene, 23015
Gm3283	5	57229266 to 57230615	1349	+	pseudogene	predicted gene 3283
Gm8115	5	57261317 to 57262005	688	+	pseudogene	predicted gene 8115
Gm18901	5	57355845 to 57357197	1352	+	pseudogene	predicted gene, 18901
Gm43706	5	57451626 to 57454277	2651	+	unclassified gene	predicted gene 43706
Gm6615	5	57460160 to 57460790	630	+	pseudogene	predicted gene 6615