MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:53606862-53736873

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rbpj	5	53466152 to 53657362	191210	+	protein coding gene	recombination signal binding protein for immunoglobulin kappa J region
Tssr46253	5	53606911 to 53606942	31	+	TSS region	transcription start site region 46253
Tssr46254	5	53609214 to 53609242	28	+	TSS region	transcription start site region 46254
Tssr46255	5	53614978 to 53614991	13	+	TSS region	transcription start site region 46255
Tssr46256	5	53629967 to 53629974	7	+	TSS region	transcription start site region 46256
Tssr46257	5	53634076 to 53634080	4	+	TSS region	transcription start site region 46257
Tssr46258	5	53635432 to 53635435	3	+	TSS region	transcription start site region 46258
Tssr46259	5	53647139 to 53647152	13	+	TSS region	transcription start site region 46259
Tssr46260	5	53651475 to 53651490	15	+	TSS region	transcription start site region 46260
Tssr51030	5	53671440 to 53671447	7	-	TSS region	transcription start site region 51030
Tssr46261	5	53671862 to 53671873	11	+	TSS region	transcription start site region 46261
Tssr46262	5	53677121 to 53677125	4	+	TSS region	transcription start site region 46262
Cckar	5	53698485 to 53707767	9282	-	protein coding gene	cholecystokinin A receptor
Tssr51031	5	53706513 to 53706525	12	-	TSS region	transcription start site region 51031
Tssr51032	5	53707312 to 53707328	16	-	TSS region	transcription start site region 51032
Tssr51033	5	53707508 to 53707519	11	-	TSS region	transcription start site region 51033
Tssr51034	5	53707532 to 53707590	58	-	TSS region	transcription start site region 51034