Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:53593485-53812767

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbpj 5 53466152 to 53657362 191210 + protein coding gene recombination signal binding protein for immunoglobulin kappa J region
Tssr51026 5 53594230 to 53594241 11 - TSS region transcription start site region 51026
Tssr51027 5 53594300 to 53594311 11 - TSS region transcription start site region 51027
Tssr51028 5 53594321 to 53594334 13 - TSS region transcription start site region 51028
Tssr51029 5 53594343 to 53594354 11 - TSS region transcription start site region 51029
Tssr46242 5 53594996 to 53595007 11 + TSS region transcription start site region 46242
Tssr46243 5 53596116 to 53596133 17 + TSS region transcription start site region 46243
Tssr46244 5 53601769 to 53601783 14 + TSS region transcription start site region 46244
Tssr46245 5 53602402 to 53602438 36 + TSS region transcription start site region 46245
Tssr46246 5 53602539 to 53602556 17 + TSS region transcription start site region 46246
Tssr46247 5 53603961 to 53603976 15 + TSS region transcription start site region 46247
Tssr46248 5 53604036 to 53604047 11 + TSS region transcription start site region 46248
Tssr46249 5 53604117 to 53604137 20 + TSS region transcription start site region 46249
Tssr46250 5 53604145 to 53604174 29 + TSS region transcription start site region 46250
Tssr46251 5 53604182 to 53604209 27 + TSS region transcription start site region 46251
Tssr46252 5 53604341 to 53604386 45 + TSS region transcription start site region 46252
Tssr46253 5 53606911 to 53606942 31 + TSS region transcription start site region 46253
Tssr46254 5 53609214 to 53609242 28 + TSS region transcription start site region 46254
Tssr46255 5 53614978 to 53614991 13 + TSS region transcription start site region 46255
Tssr46256 5 53629967 to 53629974 7 + TSS region transcription start site region 46256
Tssr46257 5 53634076 to 53634080 4 + TSS region transcription start site region 46257
Tssr46258 5 53635432 to 53635435 3 + TSS region transcription start site region 46258
Tssr46259 5 53647139 to 53647152 13 + TSS region transcription start site region 46259
Tssr46260 5 53651475 to 53651490 15 + TSS region transcription start site region 46260
Tssr51030 5 53671440 to 53671447 7 - TSS region transcription start site region 51030
Tssr46261 5 53671862 to 53671873 11 + TSS region transcription start site region 46261
Tssr46262 5 53677121 to 53677125 4 + TSS region transcription start site region 46262
Cckar 5 53698485 to 53707767 9282 - protein coding gene cholecystokinin A receptor
Tssr51031 5 53706513 to 53706525 12 - TSS region transcription start site region 51031
Tssr51032 5 53707312 to 53707328 16 - TSS region transcription start site region 51032
Tssr51033 5 53707508 to 53707519 11 - TSS region transcription start site region 51033
Tssr51034 5 53707532 to 53707590 58 - TSS region transcription start site region 51034
Cpgi15870 5 53809514 to 53809850 336 CpG island CpG island 15870
Tbc1d19 5 53809606 to 53903965 94359 + protein coding gene TBC1 domain family, member 19
Tssr46263 5 53809613 to 53809629 16 + TSS region transcription start site region 46263
Tssr46264 5 53809632 to 53809683 51 + TSS region transcription start site region 46264