Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:52788003-52988184

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zcchc4 5 52775409 to 52824665 49256 + protein coding gene zinc finger, CCHC domain containing 4
Tssr46188 5 52807134 to 52807140 6 + TSS region transcription start site region 46188
Tssr46189 5 52810215 to 52810220 5 + TSS region transcription start site region 46189
Cpgi15863 5 52833666 to 52834493 827 CpG island CpG island 15863
Tssr46190 5 52834009 to 52834031 22 + TSS region transcription start site region 46190
Tssr46191 5 52834045 to 52834112 67 + TSS region transcription start site region 46191
Tssr46192 5 52834114 to 52834167 53 + TSS region transcription start site region 46192
Anapc4 5 52834135 to 52866734 32599 + protein coding gene anaphase promoting complex subunit 4
Tssr46193 5 52834168 to 52834183 15 + TSS region transcription start site region 46193
Tssr46194 5 52834184 to 52834214 30 + TSS region transcription start site region 46194
Gm30241 5 52884817 to 52886776 1959 + lncRNA gene predicted gene, 30241
Cpgi15864 5 52888003 to 52888184 181 CpG island CpG island 15864
D5Mit171 5 52914983 to 52915117 134 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 171
Gm43664 5 52917619 to 52919209 1590 - pseudogene predicted gene 43664
Gm23532 5 52959351 to 52959462 111 - snoRNA gene predicted gene, 23532
5033403H07Rik 5 52973012 to 52992292 19280 - lncRNA gene RIKEN cDNA 5033403H07 gene
Tssr46195 5 52974888 to 52974892 4 + TSS region transcription start site region 46195
Gm30301 5 52982037 to 52995753 13716 + lincRNA gene predicted gene, 30301