Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:52130203-52210514

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm40302	5	52128818 to 52138873	10055	+	lncRNA gene	predicted gene, 40302
Mir6417	5	52135902 to 52136017	115	-	miRNA gene	microRNA 6417
Gm43176	5	52139585 to 52142573	2988	-	unclassified gene	predicted gene 43176
Dhx15	5	52150203 to 52190514	40311	-	protein coding gene	DEAH (Asp-Glu-Ala-His) box polypeptide 15
Tssr50985	5	52154308 to 52154312	4	-	TSS region	transcription start site region 50985
Gm43178	5	52174370 to 52175755	1385	-	unclassified gene	predicted gene 43178
Tssr50986	5	52184603 to 52184615	12	-	TSS region	transcription start site region 50986
Cpgi15853	5	52189795 to 52190874	1079		CpG island	CpG island 15853
Tssr46165	5	52189860 to 52189871	11	+	TSS region	transcription start site region 46165
Tssr50987	5	52190041 to 52190086	45	-	TSS region	transcription start site region 50987
Tssr50988	5	52190484 to 52190524	40	-	TSS region	transcription start site region 50988
Tssr1480	5	52190536 to 52190543	7	-	TSS region	transcription start site region 1480
Tssr46166	5	52190650 to 52190704	54	+	TSS region	transcription start site region 46166
9230114K14Rik	5	52190681 to 52197984	7303	+	lncRNA gene	RIKEN cDNA 9230114K14 gene
Tssr46167	5	52190719 to 52190728	9	+	TSS region	transcription start site region 46167
Tssr50989	5	52192184 to 52192205	21	-	TSS region	transcription start site region 50989
C130083M11Rik	5	52199984 to 52216433	16449	-	lincRNA gene	RIKEN cDNA C130083M11 gene