Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:51983818-52283873

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr50979 5 52015481 to 52015485 4 - TSS region transcription start site region 50979
Tssr50980 5 52034199 to 52034245 46 - TSS region transcription start site region 50980
Gm43174 5 52079888 to 52082332 2444 - unclassified gene predicted gene 43174
Cpgi15852 5 52112771 to 52116651 3880 CpG island CpG island 15852
Tssr50981 5 52115771 to 52115791 20 - TSS region transcription start site region 50981
Tssr50982 5 52115805 to 52115848 43 - TSS region transcription start site region 50982
Tssr50983 5 52115904 to 52115917 13 - TSS region transcription start site region 50983
Tssr50984 5 52115933 to 52115979 46 - TSS region transcription start site region 50984
Gm43177 5 52117312 to 52118523 1211 + lincRNA gene predicted gene 43177
Gm40302 5 52128818 to 52138873 10055 + lncRNA gene predicted gene, 40302
Mir6417 5 52135902 to 52136017 115 - miRNA gene microRNA 6417
Gm43176 5 52139585 to 52142573 2988 - unclassified gene predicted gene 43176
Dhx15 5 52150203 to 52190514 40311 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 15
Tssr50985 5 52154308 to 52154312 4 - TSS region transcription start site region 50985
Gm43178 5 52174370 to 52175755 1385 - unclassified gene predicted gene 43178
Tssr50986 5 52184603 to 52184615 12 - TSS region transcription start site region 50986
Cpgi15853 5 52189795 to 52190874 1079 CpG island CpG island 15853
Tssr46165 5 52189860 to 52189871 11 + TSS region transcription start site region 46165
Tssr50987 5 52190041 to 52190086 45 - TSS region transcription start site region 50987
Tssr50988 5 52190484 to 52190524 40 - TSS region transcription start site region 50988
Tssr1480 5 52190536 to 52190543 7 - TSS region transcription start site region 1480
Tssr46166 5 52190650 to 52190704 54 + TSS region transcription start site region 46166
9230114K14Rik 5 52190681 to 52197984 7303 + lncRNA gene RIKEN cDNA 9230114K14 gene
Tssr46167 5 52190719 to 52190728 9 + TSS region transcription start site region 46167
Tssr50989 5 52192184 to 52192205 21 - TSS region transcription start site region 50989
C130083M11Rik 5 52199984 to 52216433 16449 - lincRNA gene RIKEN cDNA C130083M11 gene
Gm43180 5 52239336 to 52242221 2885 + unclassified gene predicted gene 43180