Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:50804280-52154304

Filter by:
56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr46162 5 50821436 to 50821439 3 + TSS region transcription start site region 46162
Gm43014 5 50838317 to 50840759 2442 + unclassified gene predicted gene 43014
Gm43015 5 50921342 to 50921906 564 + pseudogene predicted gene 43015
Tssr46163 5 51040098 to 51040105 7 + TSS region transcription start site region 46163
D5Dcr60 5 51047743 to 51047838 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 60
Tssr46164 5 51052337 to 51052342 5 + TSS region transcription start site region 46164
Gm40319 5 51052381 to 51052861 480 + pseudogene predicted gene, 40319
D5Dcr61 5 51160804 to 51160899 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 61
Gm44377 5 51223588 to 51223674 86 - miRNA gene predicted gene, 44377
Gm29924 5 51283814 to 51289330 5516 - lncRNA gene predicted gene, 29924
D5Dcr62 5 51433103 to 51433198 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 62
Ppargc1a 5 51454250 to 51567726 113476 - protein coding gene peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
Tssr50960 5 51457745 to 51457757 12 - TSS region transcription start site region 50960
Tssr50961 5 51458075 to 51458100 25 - TSS region transcription start site region 50961
Tssr50962 5 51458117 to 51458135 18 - TSS region transcription start site region 50962
Tssr50963 5 51479280 to 51479304 24 - TSS region transcription start site region 50963
Gm42614 5 51482752 to 51484305 1553 - unclassified gene predicted gene 42614
Gm42615 5 51491097 to 51492916 1819 - unclassified gene predicted gene 42615
Tssr50964 5 51495726 to 51495741 15 - TSS region transcription start site region 50964
Tssr50965 5 51495798 to 51495809 11 - TSS region transcription start site region 50965
Tssr50966 5 51497305 to 51497311 6 - TSS region transcription start site region 50966
Gm42613 5 51499528 to 51501458 1930 + unclassified gene predicted gene 42613
Gm43605 5 51510868 to 51514293 3425 - unclassified gene predicted gene 43605
Tssr50967 5 51526310 to 51526314 4 - TSS region transcription start site region 50967
Tssr50968 5 51534526 to 51534529 3 - TSS region transcription start site region 50968
Tssr50969 5 51547569 to 51547573 4 - TSS region transcription start site region 50969
Tssr50970 5 51553862 to 51553888 26 - TSS region transcription start site region 50970
Tssr50971 5 51553896 to 51553905 9 - TSS region transcription start site region 50971
D5Dcr63 5 51557422 to 51557518 96 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 63
Tssr50972 5 51567143 to 51567148 5 - TSS region transcription start site region 50972
Tssr50973 5 51567717 to 51567732 15 - TSS region transcription start site region 50973
D5Dcr64 5 51572326 to 51572421 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 64
Tssr50974 5 51723577 to 51723579 2 - TSS region transcription start site region 50974
D5Mit298 5 51738465 to 51738587 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 298
Tssr50975 5 51772705 to 51772726 21 - TSS region transcription start site region 50975
Tssr50976 5 51797221 to 51797226 5 - TSS region transcription start site region 50976
Gm43606 5 51855220 to 51858775 3555 - unclassified gene predicted gene 43606
Cpgi15851 5 51868361 to 51868515 154 CpG island CpG island 15851
Tssr50977 5 51872101 to 51872104 3 - TSS region transcription start site region 50977
Gm42616 5 51875419 to 51879602 4183 - unclassified gene predicted gene 42616
Gm42617 5 51891986 to 51893214 1228 - unclassified gene predicted gene 42617
Gm43175 5 51907122 to 51910931 3809 - unclassified gene predicted gene 43175
Tssr50978 5 51910838 to 51910846 8 - TSS region transcription start site region 50978
Tssr50979 5 52015481 to 52015485 4 - TSS region transcription start site region 50979
Tssr50980 5 52034199 to 52034245 46 - TSS region transcription start site region 50980
Gm43174 5 52079888 to 52082332 2444 - unclassified gene predicted gene 43174
Cpgi15852 5 52112771 to 52116651 3880 CpG island CpG island 15852
Tssr50981 5 52115771 to 52115791 20 - TSS region transcription start site region 50981
Tssr50982 5 52115805 to 52115848 43 - TSS region transcription start site region 50982
Tssr50983 5 52115904 to 52115917 13 - TSS region transcription start site region 50983
Tssr50984 5 52115933 to 52115979 46 - TSS region transcription start site region 50984
Gm43177 5 52117312 to 52118523 1211 + lincRNA gene predicted gene 43177
Gm40302 5 52128818 to 52138873 10055 + lncRNA gene predicted gene, 40302
Mir6417 5 52135902 to 52136017 115 - miRNA gene microRNA 6417
Gm43176 5 52139585 to 52142573 2988 - unclassified gene predicted gene 43176
Dhx15 5 52150203 to 52190514 40311 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 15